SMTL ID : 3hda.1

PrtC methionine mutants: M226A_DESY

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.13 Å

Oligo State

monomer

Ligands

1 x ALA- GLU- ALA- ALA- GLN- ALA: Uncharacterized peptide(Non-covalent)

ALA-GLU-ALA-ALA-GLN-ALA.1: 11 residues within 4Å: Chain A: Q.132, A.133, Y.134, A.135, Y.136, Y.137, Y.141, Y.164, T.168, H.171, H.175 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:Y.136, A:Y.137, A:T.168 Hydrogen bonds: A:A.133, A:A.135, A:A.135, A:Y.136, A:Y.137, A:Y.141, A:Y.164, A:Y.164, A:H.171 Water bridges: A:A.133, A:A.133

7 x CA: CALCIUM ION(Non-covalent)

CA.2: 6 residues within 4Å: Chain A: R.248, G.250, S.252, D.280, G.282, D.285 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:R.248, A:G.250, A:S.252, A:G.282, A:D.285 CA.3: 4 residues within 4Å: Chain A: G.283, D.285, T.322, E.324 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.283, A:D.285, A:T.322, A:E.324, H2O.7 CA.4: 7 residues within 4Å: Chain A: G.329, G.331, D.333, G.346, G.347, A.348, D.351 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:G.329, A:G.331, A:D.333, A:G.346, A:D.351 CA.5: 6 residues within 4Å: Chain A: N.338, A.340, N.342, G.355, A.357, D.360 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:N.338, A:A.340, A:G.355, A:A.357, A:D.360 CA.6: 8 residues within 4Å: Chain A: G.347, A.348, G.349, D.351, G.364, G.365, A.366, D.369 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:G.347, A:G.349, A:G.364, A:A.366, A:D.369 CA.7: 6 residues within 4Å: Chain A: G.365, A.366, G.367, D.369, Q.391, D.395 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.365, A:G.367, A:D.369, A:D.395, H2O.1 CA.8: 6 residues within 4Å: Chain A: G.356, A.357, G.358, D.360, D.378, D.385 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.356, A:G.358, A:D.360, A:D.378, A:D.385, H2O.7

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.9: 3 residues within 4Å: Chain A: R.248, G.250, S.252 Ligand excluded by PLIP CL.10: 3 residues within 4Å: Chain A: Q.93, S.96, F.103 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oberholzer, A.E. et al., Metzincin's canonical methionine is responsible for the structural integrity of the zinc-binding site. Biol.Chem. (2009)

Release Date

2009-06-30

Peptides

Secreted protease C: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
P

Secreted protease C

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