SMTL ID : 3hnk.1 (2 other biounits)

Crystal structure of the dimeric assembly of the cyt cb562 variant RIDC-1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)(Covalent)

HEM.1: 19 residues within 4Å: Chain A: L.3, E.4, M.7, E.8, L.10, N.11, L.14, M.33, P.45, P.46, F.61, G.64, F.65, L.68, C.98, C.101, H.102, Y.105, R.106 19 PLIP interactions: 19 interactions with chain A, Hydrophobic interactions: A:M.7, A:L.10, A:L.10, A:N.11, A:L.14, A:P.45, A:F.65, A:F.65, A:F.65, A:L.68, A:L.68, A:R.106, A:R.106 Hydrogen bonds: A:E.4, A:E.8 Water bridges: A:R.106 pi-Stacking: A:H.102 pi-Cation interactions: A:R.106 Metal complexes: A:H.102 HEM.2: 19 residues within 4Å: Chain B: E.4, M.7, L.10, N.11, L.14, M.33, P.45, P.46, F.61, G.64, F.65, L.68, L.94, T.97, C.98, C.101, H.102, Y.105, R.106 13 PLIP interactions: 13 interactions with chain B, Hydrophobic interactions: B:M.7, B:N.11, B:L.14, B:P.45, B:F.65, B:F.65, B:F.65, B:L.68, B:L.68, B:L.94, B:R.106 Hydrogen bonds: B:E.4 Metal complexes: B:H.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Salgado, E.N. et al., Metal templated design of protein interfaces. Proc.Natl.Acad.Sci.USA (2010)

Release Date

2010-02-09

Peptides

Soluble cytochrome b562: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Soluble cytochrome b562

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