SMTL ID : 3i3d.1

E. COLI (lacZ) BETA-GALACTOSIDASE (M542A) IN COMPLEX WITH IPTG

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-tetramer

Ligands

6 x IPT: 1-methylethyl 1-thio-beta-D-galactopyranoside(Non-covalent)

IPT.1: 12 residues within 4Å: Chain A: N.102, D.201, E.461, M.502, Y.503, E.537, H.540, W.568, F.601, N.604, W.999 Ligands: NA.6 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.102, A:E.461, A:F.601, A:N.604 Water bridges: A:H.418, A:E.461, A:E.537 IPT.2: 11 residues within 4Å: Chain A: E.304, I.305, P.306, Y.642, R.645, D.648, E.650, Q.702, T.706, W.708 Ligands: DMS.12 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.645, A:D.648, A:W.708 Water bridges: A:H.646, A:A.707, A:W.708 IPT.44: 13 residues within 4Å: Chain B: N.102, D.201, E.461, M.502, Y.503, E.537, H.540, W.568, F.601, N.604, W.999 Ligands: NA.49, DMS.132 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:N.102, B:D.201, B:E.461, B:F.601 Water bridges: B:H.418, B:E.461 IPT.95: 13 residues within 4Å: Chain C: N.102, D.201, E.461, M.502, Y.503, E.537, H.540, W.568, F.601, N.604, W.999 Ligands: NA.99, DMS.127 7 PLIP interactions: 7 interactions with chain C Hydrogen bonds: C:N.102, C:E.461, C:Y.503, C:F.601, C:N.604 Water bridges: C:H.418, C:E.461 IPT.145: 13 residues within 4Å: Chain D: N.102, D.201, E.461, M.502, Y.503, E.537, H.540, W.568, F.601, N.604, W.999 Ligands: NA.150, DMS.177 9 PLIP interactions: 9 interactions with chain D Hydrophobic interactions: D:W.999 Hydrogen bonds: D:N.102, D:D.201, D:E.461, D:Y.503, D:F.601 Water bridges: D:H.418, D:E.461, D:E.461 IPT.146: 10 residues within 4Å: Chain D: E.304, I.305, P.306, Y.642, R.645, D.648, E.650, T.706, W.708 Ligands: DMS.156 6 PLIP interactions: 6 interactions with chain D Hydrogen bonds: D:R.645, D:D.648, D:W.708 Water bridges: D:H.646, D:A.707, D:W.708

13 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 3 residues within 4Å: Chain A: E.416, H.418, E.461 6 PLIP interactions: 3 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.416, A:H.418, A:E.461, H2O.1, H2O.3, H2O.6 MG.4: 6 residues within 4Å: Chain A: D.15, N.18, V.21, Y.161, Q.163, D.193 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.15, A:N.18, A:V.21, A:D.193, A:D.193 MG.5: 2 residues within 4Å: Chain A: Q.718, T.911 No protein-ligand interaction detected (PLIP) MG.45: 3 residues within 4Å: Chain B: E.416, H.418, E.461 6 PLIP interactions: 3 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:E.416, B:H.418, B:E.461, H2O.34, H2O.37, H2O.39 MG.46: 6 residues within 4Å: Chain B: D.15, N.18, V.21, Y.161, Q.163, D.193 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.15, B:N.18, B:V.21, B:D.193, B:D.193 MG.47: 3 residues within 4Å: Chain B: Q.718, T.911 Ligands: DMS.82 No protein-ligand interaction detected (PLIP) MG.48: 1 residues within 4Å: Chain B: E.369 No protein-ligand interaction detected (PLIP) MG.96: 3 residues within 4Å: Chain C: E.416, H.418, E.461 6 PLIP interactions: 3 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:E.416, C:H.418, C:E.461, H2O.72, H2O.74, H2O.77 MG.97: 5 residues within 4Å: Chain C: D.15, N.18, V.21, Q.163, D.193 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:D.15, C:N.18, C:V.21, C:D.193 MG.98: 1 residues within 4Å: Chain C: Q.718 No protein-ligand interaction detected (PLIP) MG.147: 3 residues within 4Å: Chain D: E.416, H.418, E.461 6 PLIP interactions: 3 interactions with chain D, 3 Ligand-Water interactions Metal complexes: D:E.416, D:H.418, D:E.461, H2O.104, H2O.106, H2O.109 MG.148: 5 residues within 4Å: Chain D: D.15, N.18, V.21, Q.163, D.193 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:D.15, D:N.18, D:V.21, D:D.193, D:D.193 MG.149: 2 residues within 4Å: Chain D: Q.718 Ligands: DMS.178 No protein-ligand interaction detected (PLIP)

17 x NA: SODIUM ION(Non-functional Binders)

NA.6: 5 residues within 4Å: Chain A: D.201, W.568, F.601, N.604 Ligands: IPT.1 Ligand excluded by PLIP NA.7: 4 residues within 4Å: Chain A: F.556, Y.559, P.560, L.562 Ligand excluded by PLIP NA.8: 5 residues within 4Å: Chain A: F.931, P.932, L.967, M.968, T.970 Ligand excluded by PLIP NA.9: 6 residues within 4Å: Chain A: S.647, D.648, N.649, E.650, L.670 Ligands: DMS.39 Ligand excluded by PLIP NA.49: 5 residues within 4Å: Chain B: Y.100, D.201, F.601, N.604 Ligands: IPT.44 Ligand excluded by PLIP NA.50: 4 residues within 4Å: Chain B: F.556, Y.559, P.560, L.562 Ligand excluded by PLIP NA.51: 5 residues within 4Å: Chain B: F.931, P.932, L.967, M.968, T.970 Ligand excluded by PLIP NA.52: 6 residues within 4Å: Chain B: S.647, D.648, N.649, E.650, L.670 Ligands: DMS.70 Ligand excluded by PLIP NA.53: 3 residues within 4Å: Chain B: R.336, I.337, P.483 Ligand excluded by PLIP NA.99: 6 residues within 4Å: Chain C: Y.100, D.201, W.568, F.601, N.604 Ligands: IPT.95 Ligand excluded by PLIP NA.100: 4 residues within 4Å: Chain C: F.556, Y.559, P.560, L.562 Ligand excluded by PLIP NA.101: 5 residues within 4Å: Chain C: F.931, P.932, L.967, M.968, T.970 Ligand excluded by PLIP NA.102: 6 residues within 4Å: Chain C: S.647, D.648, N.649, E.650, L.670 Ligands: DMS.118 Ligand excluded by PLIP NA.150: 6 residues within 4Å: Chain D: Y.100, D.201, W.568, F.601, N.604 Ligands: IPT.145 Ligand excluded by PLIP NA.151: 4 residues within 4Å: Chain D: F.556, Y.559, P.560, L.562 Ligand excluded by PLIP NA.152: 5 residues within 4Å: Chain D: F.931, P.932, L.967, M.968, T.970 Ligand excluded by PLIP NA.153: 5 residues within 4Å: Chain D: S.647, D.648, N.649, E.650, L.670 Ligand excluded by PLIP

149 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.10: 8 residues within 4Å: Chain A: T.229, V.330, G.331, R.448, N.449, H.450, P.451, R.482 Ligand excluded by PLIP DMS.11: 6 residues within 4Å: Chain A: R.557, H.622, Q.623, Q.625, Q.628, Q.718 Ligand excluded by PLIP DMS.12: 6 residues within 4Å: Chain A: K.380, N.383, F.626, Y.642, W.708 Ligands: IPT.2 Ligand excluded by PLIP DMS.13: 7 residues within 4Å: Chain A: P.32, F.33, A.34, W.36, D.45, A.327 Ligands: DMS.23 Ligand excluded by PLIP DMS.14: 3 residues within 4Å: Chain A: T.271, L.291, R.292 Ligand excluded by PLIP DMS.15: 4 residues within 4Å: Chain A: E.314, H.316, G.320, L.322 Ligand excluded by PLIP DMS.16: 4 residues within 4Å: Chain A: R.505, E.508, P.1001, V.1003 Ligand excluded by PLIP DMS.17: 5 residues within 4Å: Chain A: E.334, V.335, R.336, P.480, S.481 Ligand excluded by PLIP DMS.18: 4 residues within 4Å: Chain A: P.584, W.585, S.586, R.973 Ligand excluded by PLIP DMS.19: 6 residues within 4Å: Chain A: G.275, G.276, E.277, V.289, T.290, R.292 Ligand excluded by PLIP DMS.20: 4 residues within 4Å: Chain A: T.83, V.84, V.85, H.93 Ligand excluded by PLIP DMS.21: 5 residues within 4Å: Chain A: Y.105, P.106, I.107, T.108, P.596 Ligand excluded by PLIP DMS.22: 3 residues within 4Å: Chain A: H.93, G.94, Y.95 Ligand excluded by PLIP DMS.23: 7 residues within 4Å: Chain A: A.34, W.36, D.45, R.46, P.47, S.48 Ligands: DMS.13 Ligand excluded by PLIP DMS.24: 4 residues within 4Å: Chain A: F.629, R.630, Q.718, W.720 Ligand excluded by PLIP DMS.25: 4 residues within 4Å: Chain A: R.37, Q.50, W.133, H.216 Ligand excluded by PLIP DMS.26: 4 residues within 4Å: Chain A: Q.266, V.267, A.268, S.269 Ligand excluded by PLIP DMS.27: 5 residues within 4Å: Chain A: R.230, F.231, N.232, R.237, V.239 Ligand excluded by PLIP DMS.28: 5 residues within 4Å: Chain A: Y.472, T.494, T.496, D.497, R.531 Ligand excluded by PLIP DMS.29: 4 residues within 4Å: Chain A: R.630, S.632, T.635, E.637 Ligand excluded by PLIP DMS.30: 4 residues within 4Å: Chain A: I.737, E.750, L.751, G.752 Ligand excluded by PLIP DMS.31: 7 residues within 4Å: Chain A: L.377, Q.381, T.706, A.707, W.708, S.709, E.710 Ligand excluded by PLIP DMS.32: 2 residues within 4Å: Chain A: G.940, Q.956 Ligand excluded by PLIP DMS.33: 3 residues within 4Å: Chain A: W.695, Q.719, R.721 Ligand excluded by PLIP DMS.34: 5 residues within 4Å: Chain A: D.428 Chain D: H.226, R.448, W.474, V.478 Ligand excluded by PLIP DMS.35: 4 residues within 4Å: Chain A: E.57, R.59, L.125, T.126 Ligand excluded by PLIP DMS.36: 5 residues within 4Å: Chain A: L.54, N.55, W.58, L.125, F.127 Ligand excluded by PLIP DMS.37: 5 residues within 4Å: Chain A: R.282, G.283, G.284, A.286 Chain D: V.421 Ligand excluded by PLIP DMS.38: 5 residues within 4Å: Chain A: N.597, R.599, E.797, T.799, R.800 Ligand excluded by PLIP DMS.39: 3 residues within 4Å: Chain A: D.648, D.671 Ligands: NA.9 Ligand excluded by PLIP DMS.40: 6 residues within 4Å: Chain A: Q.783, F.784, T.785, H.815, Y.816, W.842 Ligand excluded by PLIP DMS.41: 5 residues within 4Å: Chain A: Y.926, P.928, Y.962, R.973, H.974 Ligand excluded by PLIP DMS.42: 3 residues within 4Å: Chain A: R.404, Y.405, A.707 Ligand excluded by PLIP DMS.43: 5 residues within 4Å: Chain A: T.697, R.699, I.714, W.717, C.914 Ligand excluded by PLIP DMS.54: 7 residues within 4Å: Chain B: T.229, V.330, G.331, R.448, N.449, P.451, R.482 Ligand excluded by PLIP DMS.55: 5 residues within 4Å: Chain B: R.557, H.622, Q.623, Q.625, Q.628 Ligand excluded by PLIP DMS.56: 5 residues within 4Å: Chain B: K.380, N.383, F.626, Y.642, W.708 Ligand excluded by PLIP DMS.57: 7 residues within 4Å: Chain B: P.32, F.33, A.34, W.36, D.45, A.327 Ligands: DMS.80 Ligand excluded by PLIP DMS.58: 3 residues within 4Å: Chain B: T.271, L.291, R.292 Ligand excluded by PLIP DMS.59: 5 residues within 4Å: Chain B: T.257, E.314, H.316, G.320, L.322 Ligand excluded by PLIP DMS.60: 5 residues within 4Å: Chain B: E.334, V.335, R.336, P.480, S.481 Ligand excluded by PLIP DMS.61: 5 residues within 4Å: Chain B: P.106, I.107, P.115, W.191 Ligands: DMS.79 Ligand excluded by PLIP DMS.62: 4 residues within 4Å: Chain B: P.584, W.585, S.586, R.973 Ligand excluded by PLIP DMS.63: 5 residues within 4Å: Chain B: G.275, G.276, V.289, T.290, R.292 Ligand excluded by PLIP DMS.64: 4 residues within 4Å: Chain B: T.83, V.84, V.85, H.93 Ligand excluded by PLIP DMS.65: 3 residues within 4Å: Chain B: L.250, R.251, D.252 Ligand excluded by PLIP DMS.66: 6 residues within 4Å: Chain B: F.231, N.232, D.233, F.235, E.334, R.336 Ligand excluded by PLIP DMS.67: 6 residues within 4Å: Chain B: D.428, P.430 Chain C: Q.445, R.448, W.474, V.478 Ligand excluded by PLIP DMS.68: 3 residues within 4Å: Chain B: H.93, G.94, Y.95 Ligand excluded by PLIP DMS.69: 4 residues within 4Å: Chain B: Y.926, Y.962, R.973 Ligands: DMS.72 Ligand excluded by PLIP DMS.70: 5 residues within 4Å: Chain B: D.648, N.649, E.650, P.669 Ligands: NA.52 Ligand excluded by PLIP DMS.71: 5 residues within 4Å: Chain B: R.37, Q.50, S.132, W.133, H.216 Ligand excluded by PLIP DMS.72: 4 residues within 4Å: Chain B: S.923, Y.926, Y.962 Ligands: DMS.69 Ligand excluded by PLIP DMS.73: 4 residues within 4Å: Chain B: V.267, N.294, V.295, E.296 Ligand excluded by PLIP DMS.74: 4 residues within 4Å: Chain B: E.369, L.397, L.401, R.404 Ligand excluded by PLIP DMS.75: 3 residues within 4Å: Chain B: R.404, Y.405, A.707 Ligand excluded by PLIP DMS.76: 3 residues within 4Å: Chain B: I.305, P.306, N.307 Ligand excluded by PLIP DMS.77: 6 residues within 4Å: Chain B: Q.381, T.706, A.707, W.708, S.709, E.710 Ligand excluded by PLIP DMS.78: 4 residues within 4Å: Chain B: R.630, S.632, T.635, E.637 Ligand excluded by PLIP DMS.79: 5 residues within 4Å: Chain B: Y.105, P.106, I.107, T.108 Ligands: DMS.61 Ligand excluded by PLIP DMS.80: 5 residues within 4Å: Chain B: A.34, W.36, D.45, R.46 Ligands: DMS.57 Ligand excluded by PLIP DMS.81: 1 residues within 4Å: Chain B: Q.49 Ligand excluded by PLIP DMS.82: 2 residues within 4Å: Chain B: R.721 Ligands: MG.47 Ligand excluded by PLIP DMS.83: 4 residues within 4Å: Chain B: T.44, D.45, R.46, P.47 Ligand excluded by PLIP DMS.84: 6 residues within 4Å: Chain B: S.53, L.54, N.55, W.58, L.125, F.127 Ligand excluded by PLIP DMS.85: 5 residues within 4Å: Chain B: I.793, S.796, V.807, E.808, K.811 Ligand excluded by PLIP DMS.86: 5 residues within 4Å: Chain B: R.505, E.508, P.1001, V.1003, Q.1008 Ligand excluded by PLIP DMS.87: 4 residues within 4Å: Chain B: R.230, F.231, N.232, V.239 Ligand excluded by PLIP DMS.88: 3 residues within 4Å: Chain B: R.425 Chain C: L.250, D.287 Ligand excluded by PLIP DMS.89: 4 residues within 4Å: Chain B: Y.472, T.494, T.496, D.497 Ligand excluded by PLIP DMS.90: 3 residues within 4Å: Chain B: W.585, D.591, H.972 Ligand excluded by PLIP DMS.91: 5 residues within 4Å: Chain B: E.57, W.58, R.59, L.125, T.126 Ligand excluded by PLIP DMS.92: 2 residues within 4Å: Chain B: V.109, N.110 Ligand excluded by PLIP DMS.93: 4 residues within 4Å: Chain B: K.621, I.714, W.717 Ligands: DMS.94 Ligand excluded by PLIP DMS.94: 5 residues within 4Å: Chain B: R.699, I.714, W.717, C.914 Ligands: DMS.93 Ligand excluded by PLIP DMS.103: 9 residues within 4Å: Chain C: T.229, V.330, G.331, R.333, R.448, N.449, H.450, P.451, R.482 Ligand excluded by PLIP DMS.104: 5 residues within 4Å: Chain C: R.557, H.622, Q.623, Q.625, Q.628 Ligand excluded by PLIP DMS.105: 5 residues within 4Å: Chain C: K.380, N.383, F.626, Y.642, W.708 Ligand excluded by PLIP DMS.106: 7 residues within 4Å: Chain C: P.32, F.33, A.34, W.36, D.45, A.327 Ligands: DMS.119 Ligand excluded by PLIP DMS.107: 3 residues within 4Å: Chain C: T.271, L.291, R.292 Ligand excluded by PLIP DMS.108: 4 residues within 4Å: Chain C: R.505, E.508, P.1001, V.1003 Ligand excluded by PLIP DMS.109: 6 residues within 4Å: Chain C: E.334, V.335, R.336, P.480, S.481 Ligands: DMS.137 Ligand excluded by PLIP DMS.110: 4 residues within 4Å: Chain C: I.99, P.106, P.115, W.191 Ligand excluded by PLIP DMS.111: 6 residues within 4Å: Chain C: I.576, P.584, W.585, S.586, R.973 Ligands: DMS.142 Ligand excluded by PLIP DMS.112: 5 residues within 4Å: Chain C: G.275, G.276, V.289, T.290, R.292 Ligand excluded by PLIP DMS.113: 3 residues within 4Å: Chain C: V.84, V.85, H.93 Ligand excluded by PLIP DMS.114: 3 residues within 4Å: Chain C: L.250, R.251, D.252 Ligand excluded by PLIP DMS.115: 5 residues within 4Å: Chain B: H.226, R.448, V.478 Chain C: D.428, P.430 Ligand excluded by PLIP DMS.116: 4 residues within 4Å: Chain C: D.82, H.93, G.94, Y.95 Ligand excluded by PLIP DMS.117: 3 residues within 4Å: Chain C: Y.926, Y.962, R.973 Ligand excluded by PLIP DMS.118: 6 residues within 4Å: Chain C: D.648, N.649, E.650, P.703, N.704 Ligands: NA.102 Ligand excluded by PLIP DMS.119: 7 residues within 4Å: Chain C: A.34, W.36, D.45, R.46, P.47, S.48 Ligands: DMS.106 Ligand excluded by PLIP DMS.120: 3 residues within 4Å: Chain C: Q.266, V.267, A.268 Ligand excluded by PLIP DMS.121: 3 residues within 4Å: Chain C: P.106, T.108, P.596 Ligand excluded by PLIP DMS.122: 4 residues within 4Å: Chain C: R.630, S.632, T.635, E.637 Ligand excluded by PLIP DMS.123: 6 residues within 4Å: Chain C: L.377, T.706, A.707, W.708, S.709, E.710 Ligand excluded by PLIP DMS.124: 3 residues within 4Å: Chain C: R.404, Y.405, A.707 Ligand excluded by PLIP DMS.125: 4 residues within 4Å: Chain C: E.314, H.316, G.320, T.321 Ligand excluded by PLIP DMS.126: 5 residues within 4Å: Chain C: R.37, Q.50, S.132, W.133, H.216 Ligand excluded by PLIP DMS.127: 4 residues within 4Å: Chain C: N.102, D.598, F.601 Ligands: IPT.95 Ligand excluded by PLIP DMS.128: 6 residues within 4Å: Chain C: S.53, L.54, N.55, G.56, E.57, L.125 Ligand excluded by PLIP DMS.129: 2 residues within 4Å: Chain C: P.306, N.307 Ligand excluded by PLIP DMS.130: 6 residues within 4Å: Chain C: E.57, W.58, R.59, S.124, L.125, T.126 Ligand excluded by PLIP DMS.131: 4 residues within 4Å: Chain C: R.230, F.231, N.232, V.239 Ligand excluded by PLIP DMS.132: 4 residues within 4Å: Chain B: V.103 Chain C: E.281, R.282 Ligands: IPT.44 Ligand excluded by PLIP DMS.133: 3 residues within 4Å: Chain C: L.823, Q.843 Chain D: V.728 Ligand excluded by PLIP DMS.134: 3 residues within 4Å: Chain C: E.67, A.68, E.71 Ligand excluded by PLIP DMS.135: 5 residues within 4Å: Chain C: Q.91, M.92, I.576, K.577, F.592 Ligand excluded by PLIP DMS.136: 4 residues within 4Å: Chain C: S.923, Y.926, R.961, Y.962 Ligand excluded by PLIP DMS.137: 7 residues within 4Å: Chain C: V.335, R.336, I.337, K.476, P.480, P.483 Ligands: DMS.109 Ligand excluded by PLIP DMS.138: 5 residues within 4Å: Chain C: W.585, S.971, H.972, H.974, L.975 Ligand excluded by PLIP DMS.139: 4 residues within 4Å: Chain C: R.721, L.722, A.723 Chain D: D.875 Ligand excluded by PLIP DMS.140: 5 residues within 4Å: Chain B: E.17, N.18 Chain C: Q.23, L.24, N.25 Ligand excluded by PLIP DMS.141: 4 residues within 4Å: Chain C: R.699, I.714, W.717, C.914 Ligand excluded by PLIP DMS.142: 6 residues within 4Å: Chain C: F.608, D.610, T.612, P.928, R.973 Ligands: DMS.111 Ligand excluded by PLIP DMS.143: 4 residues within 4Å: Chain C: Y.472, T.494, T.496, D.497 Ligand excluded by PLIP DMS.144: 2 residues within 4Å: Chain C: S.53, N.55 Ligand excluded by PLIP DMS.154: 9 residues within 4Å: Chain D: T.229, V.330, G.331, R.333, R.448, N.449, H.450, P.451, R.482 Ligand excluded by PLIP DMS.155: 5 residues within 4Å: Chain D: R.557, H.622, Q.623, Q.625, Q.628 Ligand excluded by PLIP DMS.156: 6 residues within 4Å: Chain D: K.380, N.383, F.626, Y.642, W.708 Ligands: IPT.146 Ligand excluded by PLIP DMS.157: 7 residues within 4Å: Chain D: P.32, F.33, A.34, W.36, D.45, A.327 Ligands: DMS.169 Ligand excluded by PLIP DMS.158: 3 residues within 4Å: Chain D: T.271, L.291, R.292 Ligand excluded by PLIP DMS.159: 5 residues within 4Å: Chain D: E.314, H.316, G.320, T.321, L.322 Ligand excluded by PLIP DMS.160: 5 residues within 4Å: Chain D: E.334, V.335, R.336, P.480, S.481 Ligand excluded by PLIP DMS.161: 4 residues within 4Å: Chain D: P.106, P.115, E.117 Ligands: DMS.166 Ligand excluded by PLIP DMS.162: 4 residues within 4Å: Chain D: P.584, W.585, S.586, R.973 Ligand excluded by PLIP DMS.163: 5 residues within 4Å: Chain D: G.275, G.276, V.289, T.290, R.292 Ligand excluded by PLIP DMS.164: 3 residues within 4Å: Chain D: V.84, V.85, H.93 Ligand excluded by PLIP DMS.165: 3 residues within 4Å: Chain D: L.250, R.251, D.252 Ligand excluded by PLIP DMS.166: 6 residues within 4Å: Chain D: Y.105, P.106, I.107, T.108, P.596 Ligands: DMS.161 Ligand excluded by PLIP DMS.167: 3 residues within 4Å: Chain D: H.93, G.94, Y.95 Ligand excluded by PLIP DMS.168: 4 residues within 4Å: Chain D: Y.926, Y.962, R.973, L.976 Ligand excluded by PLIP DMS.169: 7 residues within 4Å: Chain D: A.34, W.36, D.45, R.46, P.47, S.48 Ligands: DMS.157 Ligand excluded by PLIP DMS.170: 4 residues within 4Å: Chain D: F.629, R.630, Q.718, W.720 Ligand excluded by PLIP DMS.171: 4 residues within 4Å: Chain D: S.923, Y.926, R.961, Y.962 Ligand excluded by PLIP DMS.172: 5 residues within 4Å: Chain D: L.134, Q.135, E.136, G.137, S.174 Ligand excluded by PLIP DMS.173: 6 residues within 4Å: Chain D: A.736, I.737, H.739, E.750, L.751, G.752 Ligand excluded by PLIP DMS.174: 4 residues within 4Å: Chain D: R.630, S.632, T.635, E.637 Ligand excluded by PLIP DMS.175: 6 residues within 4Å: Chain D: L.377, Q.381, T.706, A.707, W.708, S.709 Ligand excluded by PLIP DMS.176: 3 residues within 4Å: Chain D: R.230, F.231, V.239 Ligand excluded by PLIP DMS.177: 5 residues within 4Å: Chain D: N.102, D.598, F.601, V.795 Ligands: IPT.145 Ligand excluded by PLIP DMS.178: 4 residues within 4Å: Chain D: W.695, Q.719, R.721 Ligands: MG.149 Ligand excluded by PLIP DMS.179: 4 residues within 4Å: Chain D: R.505, E.508, P.1001, V.1003 Ligand excluded by PLIP DMS.180: 5 residues within 4Å: Chain D: L.54, N.55, G.56, E.57, L.125 Ligand excluded by PLIP DMS.181: 4 residues within 4Å: Chain D: R.37, Q.50, S.132, W.133 Ligand excluded by PLIP DMS.182: 3 residues within 4Å: Chain D: L.343, G.346, P.348 Ligand excluded by PLIP DMS.183: 4 residues within 4Å: Chain D: P.662, L.663, A.664, S.665 Ligand excluded by PLIP DMS.184: 5 residues within 4Å: Chain D: T.618, K.621, I.714, W.717 Ligands: DMS.185 Ligand excluded by PLIP DMS.185: 6 residues within 4Å: Chain D: T.697, R.699, I.714, W.717, C.914 Ligands: DMS.184 Ligand excluded by PLIP

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Citation

Dugdale, M.L. et al., Role of Met-542 as a guide for the conformational changes of Phe-601 that occur during the reaction of β-galactosidase (Escherichia coli). Biochem.Cell Biol. (2010)

Release Date

2010-05-12

Peptides

Beta-galactosidase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Beta-galactosidase

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