SMTL ID : 3id7.1

Crystal structure of renal dipeptidase from Streptomyces coelicolor A3(2)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.20, D.22, E.123, D.320 Ligands: ZN.2 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.20, A:D.22, A:E.123, H2O.1, H2O.8 ZN.2: 8 residues within 4Å: Chain A: H.20, E.123, H.191, H.212, R.223, D.320 Ligands: ZN.1, CL.3 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.123, A:H.191, A:H.212, H2O.1

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 5 residues within 4Å: Chain A: H.191, H.212, R.223, D.320 Ligands: ZN.2 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cummings, J.A. et al., Structure, mechanism, and substrate profile for Sco3058: the closest bacterial homologue to human renal dipeptidase . Biochemistry (2010)

Release Date

2010-01-12

Peptides

Dipeptidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dipeptidase

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