SMTL ID : 3iee.1

Crystal structure of an alpha helical protein (BF3319) from Bacteroides fragilis NCTC 9343 at 1.70 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: I.27, Y.30, T.155, E.159, R.176 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.176 Water bridges: A:S.180 EDO.2: 8 residues within 4Å: Chain A: V.41, E.43, V.46, N.47, S.137, S.141, A.190, R.191 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.43, A:S.137 Water bridges: A:S.137 EDO.3: 3 residues within 4Å: Chain A: I.65, V.66, P.67 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:I.65 EDO.4: 4 residues within 4Å: Chain A: Q.139, E.142, Y.143, N.146 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.146, A:N.146 Water bridges: A:Y.143 EDO.5: 4 residues within 4Å: Chain A: V.219, M.227, K.228, Q.231 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.231 Water bridges: A:E.224, A:K.228 EDO.6: 3 residues within 4Å: Chain A: E.87, R.90, K.94 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.87, A:R.91, A:K.94 Water bridges: A:R.90, A:R.90 EDO.7: 6 residues within 4Å: Chain A: Y.30, L.34, F.148, S.180, Q.183, S.184 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.30 Water bridges: A:Y.30 EDO.8: 3 residues within 4Å: Chain A: A.64, I.65, V.66 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.66 Water bridges: A:A.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of hypothetical protein BF3319 from Bacteroides fragilis (YP_212931.1) from Bacteroides fragilis NCTC 9343 at 1.70 A resolution. To be published

Release Date

2009-08-11

Peptides

Putative exported protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative exported protein