SMTL ID : 3iln.1 (1 other biounit)

X-ray structure of the laminarinase from Rhodothermus marinus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: N.35, W.101, A.103, W.105, E.123, D.125, E.128 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:N.35, A:W.101, A:E.128 Water bridges: A:R.74, A:E.123, A:E.123, A:D.125, A:H.142, A:N.217, A:N.217 GOL.2: 5 residues within 4Å: Chain A: W.5, E.173, T.175, R.180, W.249 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.173 Water bridges: A:T.175

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 3 residues within 4Å: Chain A: E.12, G.54, D.242 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.12, A:G.54, A:D.242, A:D.242, H2O.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bleicher, L. et al., Molecular basis of the thermostability and thermophilicity of laminarinases: X-ray structure of the hyperthermostable laminarinase from Rhodothermus marinus and molecular dynamics simulations. J.Phys.Chem.B (2011)

Release Date

2010-08-18

Peptides

Laminarinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Laminarinase

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