SMTL ID : 3irp.1

Crystal structure of functional region of UafA from Staphylococcus saprophyticus at 1.50 angstrom resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 2 residues within 4Å: Chain A: D.287, T.288 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.288, A:T.288 GOL.2: 6 residues within 4Å: Chain A: P.339, L.366, E.394, N.395, I.399, H.401 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.394, A:N.395 Water bridges: A:E.394, A:H.401

5 x K: POTASSIUM ION(Non-covalent)

K.3: 4 residues within 4Å: Chain A: D.385, D.388, D.390 Ligands: K.4 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.385, A:D.390, A:D.390, H2O.1, H2O.2 K.4: 5 residues within 4Å: Chain A: N.381, D.385, D.388, D.390 Ligands: K.3 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.385, A:D.388, A:D.390, H2O.8, H2O.12 K.5: 6 residues within 4Å: Chain A: D.315, N.317, D.319, V.321, N.323, D.324 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.315, A:D.319, A:V.321, A:D.324, A:D.324 K.6: 4 residues within 4Å: Chain A: D.48, V.50, V.106, D.107 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.48, A:V.50, A:V.106 K.7: 4 residues within 4Å: Chain A: N.9, V.12, A.141, E.143 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:N.9, A:V.12, A:A.141, A:E.143, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matsuoka, E. et al., Crystal structure of the functional region of Uro-adherence factor A from Staphylococcus saprophyticus reveals participation of the B domain in ligand binding. Protein Sci. (2011)

Release Date

2010-09-08

Peptides

Uro-adherence factor A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

Uro-adherence factor A

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