SMTL ID : 3ita.1 (3 other biounits)

Crystal structure of Penicillin-Binding Protein 6 (PBP6) from E. coli in acyl-enzyme complex with ampicillin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x AIX: (2R,4S)-2-[(1R)-1-{[(2R)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid(Covalent)

AIX.1: 8 residues within 4Å: Chain A: A.39, S.40, R.194, T.210, G.211, T.212, Y.218, R.244 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:S.40, A:T.210, A:T.210, A:T.212, A:T.212 Water bridges: A:L.41, A:R.194, A:R.194, A:R.194, A:T.212, A:T.212 Salt bridges: A:R.194, A:R.244

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 1 residues within 4Å: Chain A: R.242 2 PLIP interactions: 2 interactions with chain A Water bridges: A:T.240 Salt bridges: A:R.242

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, Y. et al., Crystal structures of penicillin-binding protein 6 from Escherichia coli. J.Am.Chem.Soc. (2009)

Release Date

2009-10-20

Peptides

D-alanyl-D-alanine carboxypeptidase dacC: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D-alanyl-D-alanine carboxypeptidase dacC

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