- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x MN: MANGANESE (II) ION(Non-covalent)
- 4 x PSV: alpha-D-psicofuranose(Non-covalent)
PSV.3: 13 residues within 4Å:- Chain A: W.57, H.101, W.179, E.219, K.221, D.254, H.257, H.281, D.289, N.327
- Chain B: F.66
- Ligands: MN.1, MN.2
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:E.219, A:N.327
- Water bridges: A:H.101, A:E.219, B:R.65
PSV.6: 12 residues within 4Å:- Chain A: F.66
- Chain B: W.57, H.101, W.179, E.219, K.221, D.254, H.257, D.289, N.327
- Ligands: MN.4, MN.5
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:N.327
- Water bridges: B:N.283, A:R.65
PSV.9: 13 residues within 4Å:- Chain C: W.57, H.101, W.179, E.219, K.221, D.254, H.257, H.281, D.289, N.327
- Chain D: F.66
- Ligands: MN.7, MN.8
4 PLIP interactions:1 interactions with chain D, 3 interactions with chain C- Water bridges: D:R.65, C:E.219
- Hydrogen bonds: C:E.219, C:N.327
PSV.12: 14 residues within 4Å:- Chain C: F.66, I.429
- Chain D: W.57, H.101, W.179, E.219, K.221, D.254, H.257, H.281, D.289, N.327
- Ligands: MN.10, MN.11
2 PLIP interactions:1 interactions with chain C, 1 interactions with chain D- Water bridges: C:R.65
- Hydrogen bonds: D:N.327
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yoshida, H. et al., Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures. Febs J. (2010)
- Release Date
- 2010-02-02
- Peptides
- L-rhamnose isomerase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x MN: MANGANESE (II) ION(Non-covalent)
- 4 x PSV: alpha-D-psicofuranose(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yoshida, H. et al., Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures. Febs J. (2010)
- Release Date
- 2010-02-02
- Peptides
- L-rhamnose isomerase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D