SMTL ID : 3iv0.1

Crystal structure of SusD homolog (NP_809186.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.35 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: H.211, G.369, R.419, H.428 Ligand excluded by PLIP

5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: W.92, Y.96, P.146, Y.148, N.471 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.148, A:N.471 Water bridges: A:W.92 EDO.3: 7 residues within 4Å: Chain A: F.142, G.143, D.144, R.159, G.457, W.459, T.460 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.144, A:D.144, A:R.159 Water bridges: A:T.460, A:T.460 EDO.4: 5 residues within 4Å: Chain A: Q.174, M.209, N.230, S.233, L.234 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.174, A:S.233 Water bridges: A:Q.174 EDO.5: 5 residues within 4Å: Chain A: M.280, D.286, N.287, K.295, L.299 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.295 EDO.6: 4 residues within 4Å: Chain A: N.393, R.394, N.397, E.403 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.393

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of SusD homolog (NP_809186.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.35 A resolution. To be Published

Release Date

2009-09-08

Peptides

SusD homolog: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SusD homolog