SMTL ID : 3jb1.4 (3 other biounits)

Atomic model of cytoplasmic polyhedrosis virus with SAM

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY 3.10 Å

Oligo State

hetero-1-2-2-mer

Ligands

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.1: 18 residues within 4Å: Chain A: Y.842, I.861, G.862, R.864, A.867, I.881, D.882, P.883, A.884, F.904, F.906, I.922, A.923, V.924, N.927, E.928, P.929, Y.992 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.842, A:Y.842, A:F.904, A:P.929

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yu, X. et al., A putative ATPase mediates RNA transcription and capping in a dsRNA virus. Elife (2015)

Release Date

2015-08-12

Peptides

Structural protein VP3: A
Capsid protein VP1: BC
Viral structural protein 5: DE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

Structural protein VP3

Capsid protein VP1

Viral structural protein 5

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