SMTL ID : 3jd7.1 (3 other biounits)

The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x PLM: PALMITIC ACID(Non-covalent)

PLM.1: 10 residues within 4Å: Chain A: I.92, P.94, R.95, L.114, L.116, Y.143, P.165, M.178, N.211, M.213 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.92, A:I.92, A:P.94, A:L.114, A:L.116, A:Y.143, A:Y.143, A:Y.143 Hydrogen bonds: A:N.211 Salt bridges: A:R.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, H. et al., The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs. Sci Adv (2016)

Release Date

2016-09-14

Peptides

Capsid protein VP1: A
Capsid protein VP2: B
Capsid protein VP3: C
Capsid protein VP4: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

B
2

C
3

D
4

Capsid protein VP1

Capsid protein VP2

Capsid protein VP3

Capsid protein VP4

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