SMTL ID : 3jpz.1 (2 other biounits)

Crystal Structure of Lombricine Kinase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-dimer

Ligands

5 x NO3: NITRATE ION(Non-functional Binders)

NO3.1: 5 residues within 4Å: Chain A: D.53, N.54, H.187, N.191 Chain B: K.183 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:N.191, B:K.183 Water bridges: A:F.55 NO3.2: 7 residues within 4Å: Chain A: P.50, N.54, C.58, G.60, H.187, L.188, N.191 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:P.50, A:N.54, A:G.60 Water bridges: A:I.59, A:I.59, A:L.188, A:L.188 NO3.3: 6 residues within 4Å: Chain B: L.152, S.153, G.154, L.156, R.242, A.246 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.153, B:S.153, B:R.242 NO3.4: 7 residues within 4Å: Chain B: P.50, N.54, C.58, G.60, H.187, L.188, N.191 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:N.54, B:G.60, B:L.188 Water bridges: B:P.50, B:I.59, B:I.59, B:I.59 NO3.5: 5 residues within 4Å: Chain A: K.183 Chain B: D.53, N.54, H.187, N.191 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:N.54, B:N.191 Water bridges: B:N.54, A:K.183, A:K.183, A:K.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bush, D.J. et al., The structure of lombricine kinase: implications for phosphagen kinase conformational changes. J.Biol.Chem. (2011)

Release Date

2010-09-15

Peptides

Lombricine kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Lombricine kinase

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