- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 6 x FLC: CITRATE ANION(Non-covalent)
FLC.2: 11 residues within 4Å:- Chain A: K.19, R.24, E.106, G.108, E.110, K.145, G.147, K.149, S.150
- Chain D: K.133
- Ligands: GTP.1
15 PLIP interactions:14 interactions with chain A, 1 interactions with chain D- Hydrogen bonds: A:R.24, A:G.147, A:K.149, A:S.150, A:S.150
- Water bridges: A:K.19, A:K.19, A:S.150, A:S.150
- Salt bridges: A:K.19, A:K.19, A:R.24, A:K.145, A:K.149, D:K.133
FLC.10: 9 residues within 4Å:- Chain B: K.19, R.24, E.110, K.145, G.147, K.149, S.150
- Chain C: K.133
- Ligands: GTP.15
11 PLIP interactions:2 interactions with chain C, 9 interactions with chain B- Salt bridges: C:K.129, C:K.133, B:K.19, B:R.24, B:K.145, B:K.145, B:K.149
- Hydrogen bonds: B:R.24, B:S.150, B:S.150, B:S.150
FLC.16: 10 residues within 4Å:- Chain C: R.24, T.107, G.108, E.110, K.145, A.146, G.147, K.149, S.150
- Ligands: GTP.9
14 PLIP interactions:12 interactions with chain C, 2 interactions with chain B- Hydrogen bonds: C:R.24, C:G.108, C:K.149, C:S.150, C:S.150
- Water bridges: C:K.19, C:E.110, B:K.133, B:K.133
- Salt bridges: C:K.19, C:K.19, C:R.24, C:R.24, C:K.145
FLC.19: 11 residues within 4Å:- Chain A: K.133
- Chain D: K.19, R.24, E.106, G.108, E.110, K.145, G.147, K.149, S.150
- Ligands: GTP.18
15 PLIP interactions:14 interactions with chain D, 1 interactions with chain A- Hydrogen bonds: D:R.24, D:G.147, D:K.149, D:S.150, D:S.150
- Water bridges: D:K.19, D:K.19, D:S.150, D:S.150
- Salt bridges: D:K.19, D:K.19, D:R.24, D:K.145, D:K.149, A:K.133
FLC.27: 9 residues within 4Å:- Chain E: K.19, R.24, E.110, K.145, G.147, K.149, S.150
- Chain F: K.133
- Ligands: GTP.32
11 PLIP interactions:2 interactions with chain F, 9 interactions with chain E- Salt bridges: F:K.129, F:K.133, E:K.19, E:R.24, E:K.145, E:K.145, E:K.149
- Hydrogen bonds: E:R.24, E:S.150, E:S.150, E:S.150
FLC.33: 10 residues within 4Å:- Chain F: R.24, T.107, G.108, E.110, K.145, A.146, G.147, K.149, S.150
- Ligands: GTP.26
14 PLIP interactions:12 interactions with chain F, 2 interactions with chain E- Hydrogen bonds: F:R.24, F:G.108, F:K.149, F:S.150, F:S.150
- Water bridges: F:K.19, F:E.110, E:K.133, E:K.133
- Salt bridges: F:K.19, F:K.19, F:R.24, F:R.24, F:K.145
- 4 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 2 residues within 4Å:- Chain A: R.94, R.141
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:R.94, A:R.141
- Water bridges: A:R.94
GOL.4: 2 residues within 4Å:- Chain A: L.88, K.90
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:L.88, A:K.90, A:K.90
GOL.20: 2 residues within 4Å:- Chain D: R.94, R.141
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:R.94, D:R.141
- Water bridges: D:R.94
GOL.21: 2 residues within 4Å:- Chain D: L.88, K.90
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:L.88, D:K.90, D:K.90
- 10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.5: 4 residues within 4Å:- Chain A: R.85, E.98, T.100
- Chain C: R.10
4 PLIP interactions:1 interactions with chain C, 3 interactions with chain A- Hydrogen bonds: C:R.10, A:R.85, A:E.98, A:T.100
EDO.6: 3 residues within 4Å:- Chain A: L.42, G.45, D.51
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:D.51
EDO.11: 6 residues within 4Å:- Chain B: E.83, R.85, E.98, A.99, T.100
- Chain D: R.10
2 PLIP interactions:1 interactions with chain D, 1 interactions with chain B- Hydrogen bonds: D:R.10, B:T.100
EDO.12: 2 residues within 4Å:- Chain B: L.42, E.43
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:E.43
- Water bridges: B:D.51
EDO.13: 5 residues within 4Å:- Chain B: K.66, D.69
- Chain C: K.66, D.69
- Chain D: D.69
4 PLIP interactions:2 interactions with chain D, 2 interactions with chain B- Hydrogen bonds: D:D.69, B:K.66, B:D.69
- Water bridges: D:D.69
EDO.22: 4 residues within 4Å:- Chain D: R.85, E.98, T.100
- Chain F: R.10
3 PLIP interactions:2 interactions with chain D, 1 interactions with chain F- Hydrogen bonds: D:R.85, D:E.98, F:R.10
EDO.23: 3 residues within 4Å:- Chain D: L.42, G.45, D.51
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:D.51
EDO.28: 6 residues within 4Å:- Chain A: R.10
- Chain E: E.83, R.85, E.98, A.99, T.100
3 PLIP interactions:2 interactions with chain E, 1 interactions with chain A- Hydrogen bonds: E:T.100, E:T.100, A:R.10
EDO.29: 2 residues within 4Å:- Chain E: L.42, E.43
2 PLIP interactions:2 interactions with chain E- Hydrogen bonds: E:E.43
- Water bridges: E:D.51
EDO.30: 5 residues within 4Å:- Chain A: D.69
- Chain E: K.66, D.69
- Chain F: K.66, D.69
3 PLIP interactions:1 interactions with chain A, 1 interactions with chain E, 1 interactions with chain F- Hydrogen bonds: A:D.69, E:K.66, F:D.69
- 8 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
PEG.7: 9 residues within 4Å:- Chain A: A.64, K.65, K.66, T.67, A.68, P.76, L.77
- Ligands: PEG.17, PEG.31
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:T.67, A:T.67, A:A.68, A:L.77
PEG.8: 3 residues within 4Å:- Chain A: V.54, V.86
- Chain B: V.54
1 PLIP interactions:1 interactions with chain A- Water bridges: A:V.86
PEG.14: 9 residues within 4Å:- Chain B: A.64, K.65, K.66, T.67, A.68, P.76, L.77
- Ligands: PEG.24, PEG.34
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:A.68, B:L.77
PEG.17: 8 residues within 4Å:- Chain C: A.64, K.65, A.68, P.76, L.77, E.112
- Ligands: PEG.7, PEG.31
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:L.77
PEG.24: 9 residues within 4Å:- Chain D: A.64, K.65, K.66, T.67, A.68, P.76, L.77
- Ligands: PEG.14, PEG.34
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:T.67, D:A.68, D:L.77
PEG.25: 3 residues within 4Å:- Chain D: V.54, V.86
- Chain E: V.54
1 PLIP interactions:1 interactions with chain D- Water bridges: D:V.86
PEG.31: 9 residues within 4Å:- Chain E: A.64, K.65, K.66, T.67, A.68, P.76, L.77
- Ligands: PEG.7, PEG.17
2 PLIP interactions:2 interactions with chain E- Hydrogen bonds: E:A.68, E:L.77
PEG.34: 8 residues within 4Å:- Chain F: A.64, K.65, A.68, P.76, L.77, E.112
- Ligands: PEG.14, PEG.24
2 PLIP interactions:2 interactions with chain F- Hydrogen bonds: F:L.77, F:E.112
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kanaujia, S.P. et al., Structures of apo and GTP-bound molybdenum cofactor biosynthesis protein MoaC from Thermus thermophilus HB8. Acta Crystallogr.,Sect.D (2010)
- Release Date
- 2010-06-30
- Peptides
- Molybdenum cofactor biosynthesis protein C: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
ED
AE
BF
E
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 6 x FLC: CITRATE ANION(Non-covalent)
- 4 x GOL: GLYCEROL(Non-functional Binders)
- 10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 8 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kanaujia, S.P. et al., Structures of apo and GTP-bound molybdenum cofactor biosynthesis protein MoaC from Thermus thermophilus HB8. Acta Crystallogr.,Sect.D (2010)
- Release Date
- 2010-06-30
- Peptides
- Molybdenum cofactor biosynthesis protein C: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
ED
AE
BF
E