SMTL ID : 3jts.2 (2 other biounits)

GY9-Mamu-A*02-hb2m

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GLY- SER- GLU- ASN- LEU- LYS- SER- LEU- TYR: peptide of Gag-Pol polyprotein(Non-covalent)

GLY-SER-GLU-ASN-LEU-LYS-SER-LEU-TYR.1: 27 residues within 4Å: Chain A: M.5, Y.7, Y.9, E.63, N.66, E.70, N.73, V.76, N.77, N.80, L.81, Y.84, I.95, R.97, Y.99, H.114, S.116, Y.123, T.143, K.146, W.147, E.152, Q.155, H.156, Y.159, W.167, Y.171 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:V.76, A:L.81, A:Y.123, A:T.143, A:Y.159 Hydrogen bonds: A:Y.7, A:E.63, A:N.66, A:N.66, A:E.70, A:N.77, A:N.80, A:R.97, A:Y.99, A:S.116, A:S.116, A:E.152, A:Y.171, A:Y.171 Salt bridges: A:H.114, A:K.146, A:H.156 pi-Stacking: A:W.147

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dai, L., Structure of Mamu A*2. To be Published

Release Date

2010-09-15

Peptides

MHC class I Mamu-A*02: A
Beta-2-microglobulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

MHC class I Mamu-A*02

Beta-2-microglobulin

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