SMTL ID : 3jtw.1 (1 other biounit)

Crystal structure of Putative dihydrofolate reductase (YP_805003.1) from PEDIOCOCCUS PENTOSACEUS ATCC 25745 at 1.90 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x UNL: UNKNOWN LIGAND

UNL.1: 10 residues within 4Å: Chain A: F.9, A.11, V.25, L.28, E.29, V.32, L.65, Y.72, V.116, T.137 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.72, A:T.137 Water bridges: A:A.11, A:A.11, A:A.11 UNL.5: 10 residues within 4Å: Chain B: F.9, A.11, V.25, L.28, E.29, V.32, L.65, Y.72, V.116, T.137 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Y.72 Water bridges: B:A.11, B:A.11

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 7 residues within 4Å: Chain A: G.54, R.55, T.56, T.57, G.117, G.118, I.121 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:G.54, A:T.56, A:T.57, A:T.57, A:T.57, A:G.118 Water bridges: A:R.55, A:T.56, A:K.120, A:K.120, A:K.120, A:K.120, A:K.120 Salt bridges: A:K.120 SO4.3: 3 residues within 4Å: Chain A: R.55, T.81, S.82 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.81, A:S.82 Water bridges: A:K.120 Salt bridges: A:R.55 SO4.6: 7 residues within 4Å: Chain B: G.54, R.55, T.56, T.57, G.117, G.118, I.121 14 PLIP interactions: 14 interactions with chain B Hydrogen bonds: B:G.54, B:T.56, B:T.57, B:T.57, B:T.57, B:G.118 Water bridges: B:R.55, B:T.56, B:K.120, B:K.120, B:K.120, B:K.120, B:K.120 Salt bridges: B:K.120 SO4.7: 3 residues within 4Å: Chain B: R.55, T.81, S.82 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:T.81, B:S.82 Water bridges: B:K.120 Salt bridges: B:R.55

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 2 residues within 4Å: Chain A: H.83, L.84 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.84 EDO.8: 2 residues within 4Å: Chain B: H.83, L.84 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:L.84

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of Putative dihydrofolate reductase (YP_805003.1) from PEDIOCOCCUS PENTOSACEUS ATCC 25745 at 1.90 A resolution. To be published

Release Date

2009-10-06

Peptides

Dihydrofolate reductase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Dihydrofolate reductase

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