SMTL ID : 3k1n.3 (3 other biounits)

Crystal Structure of full-length BenM

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.99 Å

Oligo State

homo-tetramer

Ligands

4 x IMD: IMIDAZOLE(Non-covalent)

IMD.1: 6 residues within 4Å: Chain A: L.105, I.108, R.160, I.269, Y.293 Ligands: CL.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.104 IMD.3: 6 residues within 4Å: Chain B: L.105, I.108, R.160, I.269, Y.293 Ligands: CL.4 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:L.104, B:Y.293 IMD.5: 6 residues within 4Å: Chain C: L.105, I.108, L.159, I.269, Y.293 Ligands: CL.6 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:L.105, C:Y.293, C:Y.293 IMD.7: 6 residues within 4Å: Chain D: L.105, I.108, L.159, I.269, Y.293 Ligands: CL.8 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:L.105, D:Y.293

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: L.104, R.160, I.269 Ligands: IMD.1 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain B: L.104, R.160, I.269 Ligands: IMD.3 Ligand excluded by PLIP CL.6: 5 residues within 4Å: Chain C: G.103, L.104, R.160, I.269 Ligands: IMD.5 Ligand excluded by PLIP CL.8: 5 residues within 4Å: Chain D: G.103, L.104, R.160, I.269 Ligands: IMD.7 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ruangprasert, A. et al., Structure of Full-length BenM. To be Published

Release Date

2010-09-29

Peptides

HTH-type transcriptional regulator benM: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
B

D
B

HTH-type transcriptional regulator benM

Related Entries With Identical Sequence