- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 15 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 5 residues within 4Å:- Chain A: T.184, D.186, R.199, R.235
- Ligands: NAD.1
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.186
- Salt bridges: A:R.199, A:R.235
SO4.3: 6 residues within 4Å:- Chain A: S.153, T.155, S.211, T.212, G.213, A.214
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:S.153, A:T.155, A:G.213, A:G.213
SO4.4: 4 residues within 4Å:- Chain A: E.257, N.260, R.264, S.298
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.260
- Salt bridges: A:R.264
SO4.5: 4 residues within 4Å:- Chain A: A.139, D.140, I.331, N.335
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.335
SO4.7: 5 residues within 4Å:- Chain B: T.184, D.186, R.199, R.235
- Ligands: NAD.6
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:T.184, B:T.184, B:D.186
- Salt bridges: B:R.199, B:R.235
SO4.8: 6 residues within 4Å:- Chain B: S.153, T.155, S.211, T.212, G.213, A.214
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:S.153, B:T.155, B:T.212, B:T.212, B:G.213, B:A.214
SO4.9: 4 residues within 4Å:- Chain B: E.257, N.260, R.264, D.279
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:E.257, B:E.257
- Salt bridges: B:R.264
SO4.11: 5 residues within 4Å:- Chain C: T.184, D.186, R.199, R.235
- Ligands: NAD.10
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:T.184, C:D.186, C:R.199
- Salt bridges: C:R.235
SO4.12: 5 residues within 4Å:- Chain C: S.153, T.155, T.212, G.213, A.214
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:S.153, C:S.153, C:T.155, C:T.212, C:G.213
SO4.13: 5 residues within 4Å:- Chain C: P.131, T.132, Y.133, N.138, L.220
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:T.132, C:L.220
SO4.14: 4 residues within 4Å:- Chain C: Y.142, S.143, H.144, D.145
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:H.144, C:D.145
- Salt bridges: C:H.144
SO4.15: 4 residues within 4Å:- Chain C: E.257, N.260, R.264, S.298
3 PLIP interactions:3 interactions with chain C- Water bridges: C:E.257, C:R.264
- Salt bridges: C:R.264
SO4.17: 5 residues within 4Å:- Chain D: T.184, D.186, R.199, R.235
- Ligands: NAD.16
5 PLIP interactions:5 interactions with chain D- Hydrogen bonds: D:T.184, D:D.186, D:D.186
- Salt bridges: D:R.199, D:R.235
SO4.18: 6 residues within 4Å:- Chain D: S.153, T.155, S.211, T.212, G.213, A.214
6 PLIP interactions:6 interactions with chain D- Hydrogen bonds: D:S.153, D:S.153, D:T.155, D:T.212, D:G.213, D:A.214
SO4.19: 5 residues within 4Å:- Chain D: E.257, N.260, R.264, D.279, S.298
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:N.260
- Salt bridges: D:R.264
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Fermani, S. et al., Structure of photosynthetic glyceraldehyde-3-phosphate dehydrogenase (isoform A4) from Arabidopsis thaliana in complex with NAD. Acta Crystallogr.,Sect.F (2010)
- Release Date
- 2010-06-09
- Peptides
- Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EB
FC
GD
H
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 15 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Fermani, S. et al., Structure of photosynthetic glyceraldehyde-3-phosphate dehydrogenase (isoform A4) from Arabidopsis thaliana in complex with NAD. Acta Crystallogr.,Sect.F (2010)
- Release Date
- 2010-06-09
- Peptides
- Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EB
FC
GD
H