SMTL ID : 3k6b.1

X-ray crystal structure of the E2 domain of APL-1 from C. elegans, in complex with sucrose octasulfate (SOS)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x GU4: 2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose(Non-covalent)

GU4.1: 8 residues within 4Å: Chain A: T.12, N.13, E.14, H.15, D.16, K.139, M.142, H.143 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.13, A:H.15, A:D.16 Salt bridges: A:H.15, A:H.15, A:H.143

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hoopes, J.T. et al., Structural characterization of the E2 domain of APL-1, a Caenorhabditis elegans homolog of human amyloid precursor protein, and its heparin binding site. J.Biol.Chem. (2010)

Release Date

2009-11-10

Peptides

Beta-amyloid-like protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-amyloid-like protein

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