- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.90 Å
- Oligo State
- homo-12-mer
- Ligands
- 8 x PO4: PHOSPHATE ION(Non-functional Binders)
- 8 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 2 residues within 4Å:- Chain A: H.201, E.202
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:E.202, A:E.202, A:E.202
GOL.4: 2 residues within 4Å:- Chain B: H.201, E.202
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:E.202, B:E.202
GOL.8: 2 residues within 4Å:- Chain D: H.201, E.202
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:E.202, D:E.202, D:E.202
GOL.10: 2 residues within 4Å:- Chain E: H.201, E.202
2 PLIP interactions:2 interactions with chain E- Hydrogen bonds: E:E.202, E:E.202
GOL.14: 2 residues within 4Å:- Chain G: H.201, E.202
3 PLIP interactions:3 interactions with chain G- Hydrogen bonds: G:E.202, G:E.202, G:E.202
GOL.16: 2 residues within 4Å:- Chain H: H.201, E.202
2 PLIP interactions:2 interactions with chain H- Hydrogen bonds: H:E.202, H:E.202
GOL.20: 2 residues within 4Å:- Chain J: H.201, E.202
3 PLIP interactions:3 interactions with chain J- Hydrogen bonds: J:E.202, J:E.202, J:E.202
GOL.22: 2 residues within 4Å:- Chain K: H.201, E.202
2 PLIP interactions:2 interactions with chain K- Hydrogen bonds: K:E.202, K:E.202
- 8 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 5 residues within 4Å:- Chain B: Q.58, H.62, A.66, H.94, P.96
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:H.94
- Salt bridges: B:H.62, B:H.94
SO4.6: 4 residues within 4Å:- Chain C: Q.58, A.66, H.94, P.96
1 PLIP interactions:1 interactions with chain C- Salt bridges: C:H.94
SO4.9: 5 residues within 4Å:- Chain E: Q.58, H.62, A.66, H.94, P.96
3 PLIP interactions:3 interactions with chain E- Hydrogen bonds: E:H.94
- Salt bridges: E:H.62, E:H.94
SO4.12: 4 residues within 4Å:- Chain F: Q.58, A.66, H.94, P.96
1 PLIP interactions:1 interactions with chain F- Salt bridges: F:H.94
SO4.15: 5 residues within 4Å:- Chain H: Q.58, H.62, A.66, H.94, P.96
3 PLIP interactions:3 interactions with chain H- Hydrogen bonds: H:H.94
- Salt bridges: H:H.62, H:H.94
SO4.18: 4 residues within 4Å:- Chain I: Q.58, A.66, H.94, P.96
1 PLIP interactions:1 interactions with chain I- Salt bridges: I:H.94
SO4.21: 5 residues within 4Å:- Chain K: Q.58, H.62, A.66, H.94, P.96
3 PLIP interactions:3 interactions with chain K- Hydrogen bonds: K:H.94
- Salt bridges: K:H.62, K:H.94
SO4.24: 4 residues within 4Å:- Chain L: Q.58, A.66, H.94, P.96
1 PLIP interactions:1 interactions with chain L- Salt bridges: L:H.94
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nocek, B. et al., The Crystal Structure of a HK97 Family Phage Portal Protein from Corynebacterium diphtheriae to 2.9A. To be Published
- Release Date
- 2009-12-29
- Peptides
- HK97 Family Phage Portal Protein: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
AE
BF
CG
AH
BI
CJ
AK
BL
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.90 Å
- Oligo State
- homo-12-mer
- Ligands
- 8 x PO4: PHOSPHATE ION(Non-functional Binders)
- 8 x GOL: GLYCEROL(Non-functional Binders)
- 8 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nocek, B. et al., The Crystal Structure of a HK97 Family Phage Portal Protein from Corynebacterium diphtheriae to 2.9A. To be Published
- Release Date
- 2009-12-29
- Peptides
- HK97 Family Phage Portal Protein: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
AE
BF
CG
AH
BI
CJ
AK
BL
C