SMTL ID : 3klk.1

Crystal structure of Lactobacillus reuteri N-terminally truncated glucansucrase GTF180 in triclinic apo- form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: E.240, D.246, N.290, D.769 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.240, A:E.240, A:D.246, A:N.290, H2O.17

8 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 2 residues within 4Å: Chain A: W.676, K.713 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.713 Water bridges: A:W.676, A:D.723 GOL.3: 4 residues within 4Å: Chain A: T.678, T.679, E.680, R.683 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.683 Water bridges: A:T.678 GOL.4: 7 residues within 4Å: Chain A: L.243, D.286, F.717, D.719, Y.726, V.767, Q.770 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:D.286, A:Q.770, A:Q.770 Water bridges: A:R.284, A:A.287, A:Q.401, A:D.719, A:N.724 GOL.5: 5 residues within 4Å: Chain A: L.201, L.242, E.324, W.326 Ligands: GOL.6 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.324 Water bridges: A:A.287, A:Q.401, A:Q.401 GOL.6: 2 residues within 4Å: Chain A: W.326 Ligands: GOL.5 4 PLIP interactions: 4 interactions with chain A Water bridges: A:W.326, A:W.326, A:D.346, A:D.397 GOL.7: 4 residues within 4Å: Chain A: T.791, W.792, E.793, V.794 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.793, A:V.794 GOL.8: 6 residues within 4Å: Chain A: M.353, S.357, G.358, N.399, Q.403, L.444 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:M.353, A:N.399, A:N.399, A:Q.403 Water bridges: A:G.358 GOL.9: 5 residues within 4Å: Chain A: F.924, W.932, Y.959, R.969, D.985 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.959, A:R.969, A:R.969, A:D.985

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vujicic-Zagar, A. et al., Crystal structure of a 117 kDa glucansucrase fragment provides insight into evolution and product specificity of GH70 enzymes. Proc.Natl.Acad.Sci.USA (2010)

Release Date

2010-11-03

Peptides

Glucansucrase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glucansucrase

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