SMTL ID : 3ko9.1 (2 other biounits)

DTD from Plasmodium falciparum in complex with D-Arginine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

homo-dimer

Ligands

1 x DAR: D-ARGININE(Non-covalent)

DAR.1: 8 residues within 4Å: Chain A: N.139, Y.140 Chain B: R.7, N.66, T.71, W.72, G.149, V.151 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:W.72 Hydrogen bonds: B:N.66, B:N.66, B:W.72, B:W.72, B:G.149

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bhatt, T.K. et al., Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase. J.Biol.Chem. (2010)

Release Date

2009-12-01

Peptides

D-tyrosyl-tRNA(Tyr) deacylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

D-tyrosyl-tRNA(Tyr) deacylase

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