SMTL ID : 3kw7.1 (1 other biounit)

Crystal structure of LacB from Trametes sp. AH28-2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.44 Å

Oligo State

monomer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 8 residues within 4Å: Chain A: R.22, A.23, N.54, M.57, H.153, T.154, A.155, L.158 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:A.155 Hydrogen bonds: A:A.155 NAG-NAG.2: 4 residues within 4Å: Chain A: V.319, N.327, P.385, N.439 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.327

4 x CU: COPPER (II) ION(Non-covalent)

CU.3: 5 residues within 4Å: Chain A: H.400, C.456, I.458, H.461, F.466 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.400, A:C.456, A:H.461 CU.4: 5 residues within 4Å: Chain A: H.64, H.66, G.67, H.403, H.405 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.64, A:H.403 CU.5: 4 residues within 4Å: Chain A: H.111, H.403, H.405, H.455 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.111, A:H.405, A:H.455 CU.6: 5 residues within 4Å: Chain A: H.64, H.66, W.107, H.109, H.457 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.66, A:H.109, A:H.457

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)(Post Translational Modification)

NAG.7: 4 residues within 4Å: Chain A: N.217, D.234, Q.252, I.298 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.217 NAG.8: 5 residues within 4Å: Chain A: N.333, T.335, N.336, F.338, T.343 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ge, H.H. et al., Structure of native laccase B from Trametes sp. AH28-2. Acta Crystallogr.,Sect.F (2010)

Release Date

2010-03-09

Peptides

Laccase B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Laccase B

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