SMTL ID : 3kxa.1 (1 other biounit)

Crystal Structure of NGO0477 from Neisseria gonorrhoeae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

2 x ASN: ASPARAGINE(Non-covalent)

ASN.1: 7 residues within 4Å: Chain A: K.15, C.16, L.17, K.24, C.25, V.26, K.27 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.17 Hydrogen bonds: A:K.15, A:K.24 ASN.18: 4 residues within 4Å: Chain B: L.17, K.24, V.26, K.27 6 PLIP interactions: 3 interactions with chain B, 3 Ligand-Ligand interactions Hydrogen bonds: B:K.15, B:L.17, B:V.26, N.18, N.18, N.18

7 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain A: K.50 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain A: R.77, M.78 Chain B: T.34, A.36 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain A: P.124, L.125, R.128 Ligand excluded by PLIP CL.5: 1 residues within 4Å: Chain A: M.138 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain A: R.100, S.104, K.105 Ligand excluded by PLIP CL.19: 1 residues within 4Å: Chain B: K.15 Ligand excluded by PLIP CL.20: 3 residues within 4Å: Chain B: R.77, M.78, T.83 Ligand excluded by PLIP

11 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.7: 11 residues within 4Å: Chain A: Q.106 Ligands: UNX.8, UNX.9, UNX.10, UNX.11, UNX.12, UNX.13, UNX.14, UNX.15, UNX.16, UNX.17 No protein-ligand interaction detected (PLIP) UNX.8: 5 residues within 4Å: Chain A: Q.106 Ligands: UNX.7, UNX.9, UNX.10, UNX.11 No protein-ligand interaction detected (PLIP) UNX.9: 8 residues within 4Å: Chain A: Q.106 Ligands: UNX.7, UNX.8, UNX.10, UNX.11, UNX.12, UNX.13, UNX.16 No protein-ligand interaction detected (PLIP) UNX.10: 8 residues within 4Å: Chain A: Q.106 Chain B: I.23 Ligands: UNX.7, UNX.8, UNX.9, UNX.11, UNX.12, UNX.13 No protein-ligand interaction detected (PLIP) UNX.11: 9 residues within 4Å: Chain A: Q.106 Chain B: I.23 Ligands: UNX.7, UNX.8, UNX.9, UNX.10, UNX.12, UNX.13, UNX.14 No protein-ligand interaction detected (PLIP) UNX.12: 8 residues within 4Å: Chain A: Q.106 Ligands: UNX.7, UNX.9, UNX.10, UNX.11, UNX.13, UNX.14, UNX.15 No protein-ligand interaction detected (PLIP) UNX.13: 8 residues within 4Å: Ligands: UNX.7, UNX.9, UNX.10, UNX.11, UNX.12, UNX.14, UNX.15, UNX.16 No protein-ligand interaction detected (PLIP) UNX.14: 8 residues within 4Å: Chain A: Q.106 Ligands: UNX.7, UNX.11, UNX.12, UNX.13, UNX.15, UNX.16, UNX.17 No protein-ligand interaction detected (PLIP) UNX.15: 6 residues within 4Å: Ligands: UNX.7, UNX.12, UNX.13, UNX.14, UNX.16, UNX.17 No protein-ligand interaction detected (PLIP) UNX.16: 6 residues within 4Å: Ligands: UNX.7, UNX.9, UNX.13, UNX.14, UNX.15, UNX.17 No protein-ligand interaction detected (PLIP) UNX.17: 5 residues within 4Å: Chain A: Q.106 Ligands: UNX.7, UNX.14, UNX.15, UNX.16 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ren, J. et al., The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals a novel protein fold incorporating a helix-turn-helix motif. Proteins (2010)

Release Date

2010-01-19

Peptides

Putative uncharacterized protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Putative uncharacterized protein

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