SMTL ID : 3kyk.1

Crystal structure of li33 Igg1 Fab

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

hetero-1-1-mer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: W.47, A.61, D.62 Chain B: D.1, P.95 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:D.62, A:D.62, B:D.1, B:D.1 SO4.2: 4 residues within 4Å: Chain A: T.58, K.59, Y.60, K.65 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.60 Salt bridges: A:K.59, A:K.65 SO4.3: 3 residues within 4Å: Chain A: R.87, A.88, E.89 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.88 Salt bridges: A:R.87 SO4.4: 5 residues within 4Å: Chain B: K.39, R.45, P.59, R.61, E.81 3 PLIP interactions: 3 interactions with chain B Salt bridges: B:K.39, B:R.45, B:R.61

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pepinsky, R.B. et al., Improving the solubility of anti-LINGO-1 monoclonal antibody Li33 by isotype switching and targeted mutagenesis. Protein Sci. (2010)

Release Date

2010-03-16

Peptides

Heavy Chain Li33 IgG1: A
Light Chain Li33 IgG1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

Heavy Chain Li33 IgG1

Light Chain Li33 IgG1

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