SMTL ID : 3kzc.1

Crystal structure of N-acetyl-L-ornithine transcarbamylase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-trimer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 8 residues within 4Å: Chain A: S.69, R.71, T.72, R.132, H.168, C.314, L.315, R.342 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:T.72, A:E.164 Water bridges: A:M.70, A:R.71 Salt bridges: A:R.71, A:R.132, A:H.168, A:R.342 SO4.2: 8 residues within 4Å: Chain A: F.81, H.86 Chain B: F.81, H.86 Chain C: F.81, H.86 Ligands: SO4.4, SO4.6 7 PLIP interactions: 3 interactions with chain B, 1 interactions with chain C, 3 interactions with chain A Water bridges: B:H.86, B:H.86, A:G.85, A:H.86 Salt bridges: B:H.86, C:H.86, A:H.86 SO4.3: 8 residues within 4Å: Chain B: S.69, R.71, T.72, R.132, H.168, C.314, L.315, R.342 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:T.72, B:E.164 Water bridges: B:M.70, B:R.71 Salt bridges: B:R.71, B:R.132, B:H.168, B:R.342 SO4.4: 8 residues within 4Å: Chain A: F.81, H.86 Chain B: F.81, H.86 Chain C: F.81, H.86 Ligands: SO4.2, SO4.6 8 PLIP interactions: 3 interactions with chain B, 2 interactions with chain C, 3 interactions with chain A Water bridges: B:G.85, B:H.86, C:H.86, A:H.86, A:H.86 Salt bridges: B:H.86, C:H.86, A:H.86 SO4.5: 8 residues within 4Å: Chain C: S.69, R.71, T.72, R.132, H.168, C.314, L.315, R.342 9 PLIP interactions: 9 interactions with chain C Hydrogen bonds: C:T.72, C:T.72, C:E.164 Water bridges: C:M.70, C:R.71 Salt bridges: C:R.71, C:R.132, C:H.168, C:R.342 SO4.6: 8 residues within 4Å: Chain A: F.81, H.86 Chain B: F.81, H.86 Chain C: F.81, H.86 Ligands: SO4.2, SO4.4 9 PLIP interactions: 3 interactions with chain B, 3 interactions with chain C, 3 interactions with chain A Water bridges: B:H.86, B:H.86, C:G.85, C:H.86, A:H.86, A:H.86 Salt bridges: B:H.86, C:H.86, A:H.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shi, D. et al., Crystal structure of N-acetylornithine transcarbamylase from Xanthomonas campestris: a novel enzyme in a new arginine biosynthetic pathway found in several eubacteria. J.Biol.Chem. (2005)

Release Date

2010-03-31

Peptides

N-acetylornithine carbamoyltransferase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

N-acetylornithine carbamoyltransferase

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