SMTL ID : 3l8f.1

Crystal Structure of D,D-heptose 1.7-bisphosphate phosphatase from E. Coli complexed with magnesium and phosphate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: D.11, D.13, D.136, K.137 Ligands: PO4.3 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.11, A:D.13, A:D.136, H2O.4

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain A: C.92, H.94, C.107, C.109, R.110 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.92, A:H.94, A:C.107, A:C.109

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 8 residues within 4Å: Chain A: D.11, R.12, D.13, T.53, N.54, K.111, K.137 Ligands: MG.1 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:D.11, A:R.12, A:D.13, A:D.13, A:T.53, A:N.54 Water bridges: A:K.111, A:E.139 Salt bridges: A:K.111, A:K.137

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nguyen, H.H. et al., Structural Determinants of Substrate Recognition in the HAD Superfamily Member d-glycero-d-manno-Heptose-1,7-bisphosphate Phosphatase (GmhB) . Biochemistry (2010)

Release Date

2010-02-02

Peptides

D,D-heptose 1,7-bisphosphate phosphatase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D,D-heptose 1,7-bisphosphate phosphatase

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