SMTL ID : 3lgi.1

Structure of the protease domain of DegS (DegS-deltaPDZ) at 1.65 A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-trimer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 6 residues within 4Å: Chain A: T.100, R.161, N.163, F.164, I.211, L.215 2 PLIP interactions: 2 interactions with chain A Water bridges: A:N.163 Salt bridges: A:R.161 PO4.2: 9 residues within 4Å: Chain A: Y.22, V.129, Q.145 Chain B: Y.22, V.129, Q.145 Chain C: Y.22, V.129, Q.145 9 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B, 4 interactions with chain C Hydrogen bonds: A:Y.22, A:Q.145, A:Q.145, B:Y.22, B:Q.145, C:Y.22, C:Q.145 Water bridges: C:Y.22, C:Y.22

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sohn, J. et al., Allostery is an intrinsic property of the protease domain of DegS: implications for enzyme function and evolution. J.Biol.Chem. (2010)

Release Date

2010-08-25

Peptides

Protease degS: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Protease degS