SMTL ID : 3lin.4 (5 other biounits)

crystal structure of HTLV protease complexed with the inhibitor, KNI-10562

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

homo-dimer

Ligands

1 x E13: N-[(2S,3S)-4-{(4R)-4-[(2,2-dimethylpropyl)carbamoyl]-5,5-dimethyl-1,3-thiazolidin-3-yl}-3-hydroxy-4-oxo-1-phenylbutan-2-yl]-N~2~-{(2S)-2-[(methoxycarbonyl)amino]-2-phenylacetyl}-3-methyl-L-valinamide(Non-covalent)

E13.1: 25 residues within 4Å: Chain A: R.10, D.32, G.34, A.35, M.37, V.39, V.56, L.57, G.58, A.59, L.91, W.98, I.100 Chain B: L.30, D.32, G.34, A.35, D.36, M.37, S.55, V.56, L.57, G.58, A.59, L.91 23 PLIP interactions: 13 interactions with chain B, 10 interactions with chain A Hydrophobic interactions: B:L.30, B:A.35, B:V.56, B:L.57, B:A.59, B:L.91, A:A.35, A:V.39, A:V.56, A:A.59, A:W.98, A:W.98, A:W.98, A:I.100 Hydrogen bonds: B:D.32, B:G.34, B:D.36, B:D.36, B:D.36, B:L.57 Water bridges: B:R.103, A:A.59 pi-Cation interactions: A:R.10

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Satoh, T. et al., Crystal structures of inhibitor complexes of human T-cell leukemia virus (HTLV-1) protease. J.Mol.Biol. (2010)

Release Date

2010-07-14

Peptides

Protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
H

Protease

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