SMTL ID : 3ljk.1

Glucose-6-phosphate isomerase from Francisella tularensis.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.48 Å

Oligo State

homo-dimer

Ligands

2 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.1: 6 residues within 4Å: Chain A: Q.163, P.164, H.166, H.404 Chain B: Q.185, H.188 9 PLIP interactions: 4 interactions with chain B, 5 interactions with chain A Hydrogen bonds: B:Q.185, A:Q.163, A:Q.163 Water bridges: B:H.188, B:H.188, A:R.160, A:H.404 Salt bridges: B:H.188, A:H.404 MES.5: 6 residues within 4Å: Chain A: Q.185, H.188 Chain B: Q.163, P.164, H.166, H.404 9 PLIP interactions: 2 interactions with chain A, 7 interactions with chain B Hydrogen bonds: A:Q.185, B:Q.163, B:Q.163 Salt bridges: A:H.188, B:H.404 Water bridges: B:R.160, B:H.404, B:H.404, B:H.404

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: K.126, R.131, W.132, R.133, N.232, D.250, H.253 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.126, A:R.133, A:R.133, A:D.250 Water bridges: A:K.126, A:N.232 GOL.6: 7 residues within 4Å: Chain B: K.126, R.131, W.132, R.133, N.232, D.250, H.253 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:K.126, B:R.133, B:R.133, B:D.250, B:D.250 Water bridges: B:K.126, B:N.232

2 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.3: 8 residues within 4Å: Chain A: H.39, Q.40, N.41, I.42, S.293, Y.474, S.475, A.478 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Q.40, A:Y.474, A:Y.474, A:A.478 Hydrogen bonds: A:Q.40, A:N.41, A:N.41, A:I.42 Water bridges: A:Y.474 IPA.7: 8 residues within 4Å: Chain B: H.39, Q.40, N.41, I.42, S.293, Y.474, S.475, A.478 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:Q.40, B:Y.474, B:Y.474, B:A.478 Hydrogen bonds: B:Q.40, B:N.41, B:N.41, B:I.42

2 x CA: CALCIUM ION(Non-covalent)

CA.4: 1 residues within 4Å: Chain A: E.64 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:E.64, H2O.4, H2O.4, H2O.8, H2O.21 CA.8: 1 residues within 4Å: Chain B: E.64 5 PLIP interactions: 1 interactions with chain B, 4 Ligand-Water interactions Metal complexes: B:E.64, H2O.32, H2O.32, H2O.36, H2O.49

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Osipiuk, J. et al., X-ray crystal structure of glucose-6-phosphate isomerase from Francisella tularensis. To be Published

Release Date

2010-03-16

Peptides

Glucose-6-phosphate isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glucose-6-phosphate isomerase

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