SMTL ID : 3lsj.1

Crystal structure of DesT in complex with palmitoyl-CoA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x PLM: PALMITIC ACID(Non-covalent)

PLM.1: 11 residues within 4Å: Chain A: F.71, L.75, S.92, I.132, L.136, V.161, V.162, V.165, F.166, M.198 Ligands: COA.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.132, A:L.136, A:V.161, A:V.162, A:V.165, A:F.166, A:F.166 PLM.4: 11 residues within 4Å: Chain B: F.71, L.75, S.92, I.132, L.136, V.161, V.162, V.165, F.166, M.198 Ligands: COA.3 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.75, B:I.132, B:L.136, B:V.161, B:V.162, B:V.165, B:F.166, B:F.166

2 x COA: COENZYME A(Non-covalent)

COA.2: 11 residues within 4Å: Chain A: L.85, L.88, K.145, M.198, I.199, K.202 Chain B: H.203, W.204, H.205, G.206 Ligands: PLM.1 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:H.203, B:H.205 Hydrophobic interactions: A:K.145 COA.3: 10 residues within 4Å: Chain A: H.203, W.204, H.205, G.206 Chain B: L.88, K.145, R.195, M.198, I.199 Ligands: PLM.4 6 PLIP interactions: 4 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:K.145, B:K.145 Water bridges: B:M.146 Salt bridges: B:R.195 Hydrogen bonds: A:H.203, A:H.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miller, D.J. et al., Structural basis for the transcriptional regulation of membrane lipid homeostasis. Nat.Struct.Mol.Biol. (2010)

Release Date

2010-08-04

Peptides

DesT: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DesT

Related Entries With Identical Sequence