- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 2 x UD2: URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE(Non-covalent)
UD2.2: 23 residues within 4Å:- Chain A: G.124, S.125, S.164, S.165, S.166, Y.188, Y.215, N.217, A.231, V.232, K.235, W.236, Y.247, I.248, N.249, T.254, R.256, L.293, R.321, D.324, V.325, S.328
- Ligands: NAD.1
22 PLIP interactions:22 interactions with chain A- Hydrophobic interactions: A:V.232, A:V.325
- Hydrogen bonds: A:S.125, A:S.164, A:S.165, A:S.165, A:Y.188, A:N.217, A:N.217, A:N.217, A:N.217, A:V.232, A:Y.247, A:N.249, A:N.249, A:D.324
- Water bridges: A:V.126, A:R.321, A:R.321
- Salt bridges: A:R.256, A:R.321, A:R.321
UD2.5: 25 residues within 4Å:- Chain B: G.124, S.125, S.164, S.165, S.166, Y.188, Y.215, N.217, A.231, V.232, K.235, W.236, Y.247, I.248, N.249, T.254, R.256, L.293, R.318, R.321, D.324, V.325, S.328
- Ligands: NAD.4, GLY.7
24 PLIP interactions:24 interactions with chain B- Hydrophobic interactions: B:V.232, B:V.325
- Hydrogen bonds: B:S.125, B:S.164, B:S.165, B:S.165, B:N.217, B:N.217, B:N.217, B:V.232, B:K.235, B:Y.247, B:N.249, B:N.249, B:R.318, B:D.324
- Water bridges: B:V.126, B:R.321, B:R.321, B:R.321, B:D.324
- Salt bridges: B:R.256, B:R.321, B:R.321
- 2 x GLY: GLYCINE(Non-covalent)
GLY.3: 6 residues within 4Å:- Chain A: V.156, Q.157, G.207, F.208, K.209, K.279
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:Q.157, A:K.209, A:K.279
- Water bridges: A:F.159
GLY.7: 5 residues within 4Å:- Chain B: K.235, N.249, R.318, R.321
- Ligands: UD2.5
6 PLIP interactions:4 interactions with chain B, 2 Ligand-Ligand interactions- Hydrogen bonds: B:N.249, G.7, G.7
- Salt bridges: B:K.235, B:R.318, B:R.321
- 1 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bhatt, V.S. et al., Altered architecture of substrate binding region defines the unique specificity of UDP-GalNAc 4-epimerases. Protein Sci. (2011)
- Release Date
- 2010-07-21
- Peptides
- WbgU: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 2 x UD2: URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE(Non-covalent)
- 2 x GLY: GLYCINE(Non-covalent)
- 1 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bhatt, V.S. et al., Altered architecture of substrate binding region defines the unique specificity of UDP-GalNAc 4-epimerases. Protein Sci. (2011)
- Release Date
- 2010-07-21
- Peptides
- WbgU: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
C