SMTL ID : 3lvc.1 (2 other biounits)

Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). Colorless form.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.14 Å

Oligo State

homo-dimer

Ligands

5 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: H.146, N.147, K.164, R.166 Chain B: N.168 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:N.147, A:N.147, B:E.140 Water bridges: A:N.147, A:K.164, A:K.164 GOL.2: 5 residues within 4Å: Chain A: N.168 Chain B: H.146, N.147, K.164, R.166 6 PLIP interactions: 5 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:N.147, B:K.164, A:E.140 Water bridges: B:N.147, B:K.164, B:K.164 GOL.3: 6 residues within 4Å: Chain B: E.93, R.94, T.95, Y.180, Q.181, Q.182 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.94, B:Y.180 Water bridges: B:T.95, B:S.106 GOL.4: 6 residues within 4Å: Chain B: K.105, S.106, R.107, E.122, L.123, T.124 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:R.107, B:E.122 Water bridges: B:S.106, B:S.106, B:E.122, B:L.123 GOL.5: 3 residues within 4Å: Chain B: K.52, K.212, D.214 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.214

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pletneva, N.V. et al., Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis. J.Biol.Chem. (2010)

Release Date

2010-03-09

Peptides

Green fluorescent protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Green fluorescent protein

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