SMTL ID : 3m02.1

The Crystal Structure of 5-epi-aristolochene synthase complexed with (2-cis,6-trans)-2-fluorofarnesyl diphosphate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

3 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: R.266, D.303, D.307 Ligands: 2CF.4 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.303, H2O.3 MG.2: 4 residues within 4Å: Chain A: D.303, D.307, E.381 Ligands: 2CF.4 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.303, A:D.307, H2O.3 MG.3: 6 residues within 4Å: Chain A: R.443, D.446, D.447, T.450, E.454, T.462 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.446, A:D.447, A:T.450, A:E.454, H2O.5

1 x 2CF: (2E,6E)-2-fluoro-3,7,11-trimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate(Non-covalent)

2CF.4: 15 residues within 4Å: Chain A: R.266, I.296, S.300, D.303, T.403, T.404, T.405, Y.406, C.442, R.443, D.446, E.454, Y.522 Ligands: MG.1, MG.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:T.404, A:Y.406, A:D.446 Hydrogen bonds: A:R.443 Water bridges: A:T.450 Salt bridges: A:R.266

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Noel, J.P. et al., Structural elucidation of cisoid and transoid cyclization pathways of a sesquiterpene synthase using 2-fluorofarnesyl diphosphates. Acs Chem.Biol. (2010)

Release Date

2010-07-07

Peptides

Aristolochene synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Aristolochene synthase

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