SMTL ID : 3m62.1

Crystal structure of Ufd2 in complex with the ubiquitin-like (UBL) domain of Rad23

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)

1PE.1: 9 residues within 4Å: Chain A: I.336, S.337, Y.338, F.497, P.498, F.499, Q.501, E.567 Ligands: K.2 No protein-ligand interaction detected (PLIP)

1 x K: POTASSIUM ION(Non-covalent)

K.2: 2 residues within 4Å: Chain A: P.498 Ligands: 1PE.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:P.498

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hanzelmann, P. et al., The yeast E4 ubiquitin ligase Ufd2 interacts with the ubiquitin-like domains of Rad23 and Dsk2 via a novel and distinct ubiquitin-like binding domain. J.Biol.Chem. (2010)

Release Date

2010-04-28

Peptides

Ubiquitin conjugation factor E4: A
UV excision repair protein RAD23: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ubiquitin conjugation factor E4

UV excision repair protein RAD23

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