SMTL ID : 3mnv.2 (1 other biounit)

Crystal structure of the non-neutralizing HIV antibody 13H11 Fab fragment

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: Q.45, K.47, Q.50, K.53 3 PLIP interactions: 3 interactions with chain A Water bridges: A:Q.50 Salt bridges: A:K.47, A:K.53 SO4.2: 3 residues within 4Å: Chain A: P.67, D.68, R.69 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.68, A:R.69

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 6 residues within 4Å: Chain A: A.14, E.113, I.114, Y.148, Q.174, Y.181 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.181, A:Y.181

1 x NO3: NITRATE ION(Non-functional Binders)

NO3.4: 1 residues within 4Å: Chain A: S.30 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.30 Water bridges: A:Q.29

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nicely, N.I. et al., Crystal structure of a non-neutralizing antibody to the HIV-1 gp41 membrane-proximal external region. Nat.Struct.Mol.Biol. (2010)

Release Date

2010-11-17

Peptides

ANTI-HIV-1 ANTIBODY 13H11 LIGHT CHAIN: A
ANTI-HIV-1 ANTIBODY 13H11 HEAVY CHAIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

ANTI-HIV-1 ANTIBODY 13H11 LIGHT CHAIN

ANTI-HIV-1 ANTIBODY 13H11 HEAVY CHAIN

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