SMTL ID : 3mry.1

Crystal Structure of type I ribosome inactivating protein from Momordica balsamina with 6-aminopurine at 2.0A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: V.208, T.226, N.227, T.229 No protein-ligand interaction detected (PLIP)

1 x ADE: ADENINE(Non-covalent)

ADE.2: 9 residues within 4Å: Chain A: V.69, Y.70, I.71, G.109, N.110, Y.111, I.155, A.159, R.163 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:I.71, A:I.71, A:Y.111, A:E.160, A:R.163, A:R.163

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 6 residues within 4Å: Chain A: L.6, A.9, L.129, P.130, A.175, Y.176 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.175 Water bridges: A:L.6, A:G.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kushwaha, G.S. et al., Crystal Structure of type I ribosome inactivating protein from Momordica balsamina with 6-aminopurine at 2.0A resolution. To be Published

Release Date

2010-06-23

Peptides

Ribosome inactivating protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ribosome inactivating protein