SMTL ID : 3mst.1

Crystal structure of a Putative nitrate transport protein (TVN0104) from THERMOPLASMA VOLCANIUM at 1.35 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

1 x UNL: UNKNOWN LIGAND

UNL.1: 13 residues within 4Å: Chain A: I.78, M.80, Y.81, L.100, N.104, F.146, M.150, L.155, D.156, L.157, S.159, Y.230 Ligands: CL.2 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:I.78, A:N.104, A:N.104, A:L.157, A:L.157, A:S.159, A:Y.230, A:Y.230 Water bridges: A:D.79, A:D.156

5 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 5 residues within 4Å: Chain A: R.77, I.78, L.157, S.159 Ligands: UNL.1 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain A: R.220, R.227, E.241, I.242 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain A: R.96, K.97, N.118 Ligand excluded by PLIP CL.5: 3 residues within 4Å: Chain A: T.217, K.218, K.219 Ligand excluded by PLIP CL.6: 4 residues within 4Å: Chain A: L.70, K.71, I.240, E.241 Ligand excluded by PLIP

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.7: 6 residues within 4Å: Chain A: P.29, M.80, Y.81, G.137, E.139, Y.200 1 PLIP interactions: 1 interactions with chain A Water bridges: A:G.137

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.8: 5 residues within 4Å: Chain A: E.40, L.41, P.42, A.174, Q.177 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.177 Water bridges: A:A.174 EDO.9: 3 residues within 4Å: Chain A: G.90, R.91, Q.115 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.91, A:R.91 Water bridges: A:Y.132 EDO.10: 3 residues within 4Å: Chain A: A.114, Q.115, V.116 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:V.116, A:V.116 Water bridges: A:A.114, A:Q.115, A:Q.115 EDO.11: 3 residues within 4Å: Chain A: D.120, G.121, D.122 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.120, A:G.121, A:D.122

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of a Putative nitrate transport protein (TVN0104) from THERMOPLASMA VOLCANIUM at 1.35 A resolution. To be published

Release Date

2011-02-09

Peptides

Putative nitrate transport protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative nitrate transport protein