SMTL ID : 3mww.2 (1 other biounit)

Crystal structure of HCV NS5B polymerase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x BIW: 1-[2-(4-carboxypiperidin-1-yl)-2-oxoethyl]-3-cyclohexyl-2-furan-3-yl-1H-indole-6-carboxylic acid(Non-covalent)

BIW.1: 11 residues within 4Å: Chain A: M.36, V.37, A.395, A.396, H.428, L.492, G.493, V.494, P.495, W.500, R.503 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:A.396, A:W.500 Salt bridges: A:R.503

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 7 residues within 4Å: Chain A: R.48, K.51, R.158, D.220, T.221, R.222, C.223 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:C.223 Salt bridges: A:R.48, A:K.51, A:R.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

LaPlante, S.R. et al., Importance of ligand bioactive conformation in the discovery of potent indole-diamide inhibitors of the hepatitis C virus NS5B. J.Am.Chem.Soc. (2010)

Release Date

2010-10-27

Peptides

Genome polyprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Genome polyprotein

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