SMTL ID : 3n1w.1

Human FPPS COMPLEX WITH FBS_02

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.56 Å

Oligo State

homo-dimer

Ligands

2 x 3N2: (5-chloro-1-benzothiophen-3-yl)acetic acid(Non-covalent)

3N2.1: 9 residues within 4Å: Chain A: N.56, R.57, T.60, S.202, F.203, F.236, L.341, K.344 Ligands: PO4.2 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:N.56, A:N.56, A:F.203, A:F.236, A:L.341, A:K.344 Hydrogen bonds: A:N.56 Water bridges: A:N.56 Salt bridges: A:K.54, A:R.57 3N2.3: 9 residues within 4Å: Chain B: N.56, R.57, T.60, S.202, F.203, F.236, L.341, K.344 Ligands: PO4.4 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:N.56, B:N.56, B:F.203, B:F.236, B:L.341, B:K.344 Hydrogen bonds: B:N.56 Water bridges: B:N.56 Salt bridges: B:K.54, B:R.57

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 6 residues within 4Å: Chain A: G.53, K.54, R.57, Q.93, R.110 Ligands: 3N2.1 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:K.54, A:R.57, A:Q.93 Water bridges: A:Y.55, A:N.56, A:N.56, A:R.110 Salt bridges: A:K.54, A:R.110 PO4.4: 6 residues within 4Å: Chain B: G.53, K.54, R.57, Q.93, R.110 Ligands: 3N2.3 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:K.54, B:R.57, B:Q.93 Water bridges: B:Y.55, B:N.56, B:N.56, B:R.110 Salt bridges: B:K.54, B:R.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jahnke, W. et al., Allosteric non-bisphosphonate FPPS inhibitors identified by fragment-based discovery. Nat.Chem.Biol. (2010)

Release Date

2010-08-18

Peptides

FARNESYL PYROPHOSPHATE SYNTHASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

B
F

FARNESYL PYROPHOSPHATE SYNTHASE

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