SMTL ID : 3n51.1

Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with bumped kinase inhibitor RM-1-95

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x BK3: 3-(naphthalen-1-ylmethyl)-1-(piperidin-4-ylmethyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine(Non-covalent)

BK3.1: 16 residues within 4Å: Chain A: L.34, V.42, A.55, V.56, K.57, M.89, L.91, L.103, E.106, V.107, Y.108, E.112, E.155, L.158, I.171, D.172 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.42, A:A.55, A:K.57, A:L.91, A:L.103, A:L.158 Hydrogen bonds: A:E.106, A:Y.108, A:E.112, A:E.112

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 3 residues within 4Å: Chain A: Y.244, F.246, R.263 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.263 pi-Cation interactions: A:Y.244

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 5 residues within 4Å: Chain A: H.85, S.137, T.140, Y.141, K.144 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.137

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Murphy, R.C. et al., Discovery of Potent and Selective Inhibitors of Calcium-Dependent Protein Kinase 1 (CDPK1) from C. parvum and T. gondii. ACS Med Chem Lett (2010)

Release Date

2010-07-21

Peptides

Calmodulin-domain protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Calmodulin-domain protein kinase 1

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