- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-60-mer
- Ligands
- 60 x CA: CALCIUM ION(Non-covalent)
- 120 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 5 residues within 4Å:- Chain A: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.3: 2 residues within 4Å:- Chain A: E.139
- Chain E: N.275
No protein-ligand interaction detected (PLIP)MG.5: 5 residues within 4Å:- Chain B: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.6: 2 residues within 4Å:- Chain A: N.275
- Chain B: E.139
No protein-ligand interaction detected (PLIP)MG.8: 5 residues within 4Å:- Chain C: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.9: 2 residues within 4Å:- Chain B: N.275
- Chain C: E.139
No protein-ligand interaction detected (PLIP)MG.11: 5 residues within 4Å:- Chain D: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.12: 2 residues within 4Å:- Chain C: N.275
- Chain D: E.139
No protein-ligand interaction detected (PLIP)MG.14: 5 residues within 4Å:- Chain E: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.15: 2 residues within 4Å:- Chain D: N.275
- Chain E: E.139
No protein-ligand interaction detected (PLIP)MG.17: 5 residues within 4Å:- Chain F: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.18: 2 residues within 4Å:- Chain F: E.139
- Chain J: N.275
No protein-ligand interaction detected (PLIP)MG.20: 5 residues within 4Å:- Chain G: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.21: 2 residues within 4Å:- Chain F: N.275
- Chain G: E.139
No protein-ligand interaction detected (PLIP)MG.23: 5 residues within 4Å:- Chain H: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.24: 2 residues within 4Å:- Chain G: N.275
- Chain H: E.139
No protein-ligand interaction detected (PLIP)MG.26: 5 residues within 4Å:- Chain I: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.27: 2 residues within 4Å:- Chain H: N.275
- Chain I: E.139
No protein-ligand interaction detected (PLIP)MG.29: 5 residues within 4Å:- Chain J: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.30: 2 residues within 4Å:- Chain I: N.275
- Chain J: E.139
No protein-ligand interaction detected (PLIP)MG.32: 5 residues within 4Å:- Chain K: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.33: 2 residues within 4Å:- Chain K: E.139
- Chain O: N.275
No protein-ligand interaction detected (PLIP)MG.35: 5 residues within 4Å:- Chain L: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.36: 2 residues within 4Å:- Chain K: N.275
- Chain L: E.139
No protein-ligand interaction detected (PLIP)MG.38: 5 residues within 4Å:- Chain M: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.39: 2 residues within 4Å:- Chain L: N.275
- Chain M: E.139
No protein-ligand interaction detected (PLIP)MG.41: 5 residues within 4Å:- Chain N: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.42: 2 residues within 4Å:- Chain M: N.275
- Chain N: E.139
No protein-ligand interaction detected (PLIP)MG.44: 5 residues within 4Å:- Chain O: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.45: 2 residues within 4Å:- Chain N: N.275
- Chain O: E.139
No protein-ligand interaction detected (PLIP)MG.47: 5 residues within 4Å:- Chain P: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.48: 2 residues within 4Å:- Chain P: E.139
- Chain T: N.275
No protein-ligand interaction detected (PLIP)MG.50: 5 residues within 4Å:- Chain Q: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.51: 2 residues within 4Å:- Chain P: N.275
- Chain Q: E.139
No protein-ligand interaction detected (PLIP)MG.53: 5 residues within 4Å:- Chain R: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.54: 2 residues within 4Å:- Chain Q: N.275
- Chain R: E.139
No protein-ligand interaction detected (PLIP)MG.56: 5 residues within 4Å:- Chain S: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.57: 2 residues within 4Å:- Chain R: N.275
- Chain S: E.139
No protein-ligand interaction detected (PLIP)MG.59: 5 residues within 4Å:- Chain T: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.60: 2 residues within 4Å:- Chain S: N.275
- Chain T: E.139
No protein-ligand interaction detected (PLIP)MG.62: 5 residues within 4Å:- Chain U: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.63: 2 residues within 4Å:- Chain U: E.139
- Chain Y: N.275
No protein-ligand interaction detected (PLIP)MG.65: 5 residues within 4Å:- Chain V: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.66: 2 residues within 4Å:- Chain U: N.275
- Chain V: E.139
No protein-ligand interaction detected (PLIP)MG.68: 5 residues within 4Å:- Chain W: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.69: 2 residues within 4Å:- Chain V: N.275
- Chain W: E.139
No protein-ligand interaction detected (PLIP)MG.71: 5 residues within 4Å:- Chain X: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.72: 2 residues within 4Å:- Chain W: N.275
- Chain X: E.139
No protein-ligand interaction detected (PLIP)MG.74: 5 residues within 4Å:- Chain Y: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.75: 2 residues within 4Å:- Chain X: N.275
- Chain Y: E.139
No protein-ligand interaction detected (PLIP)MG.77: 5 residues within 4Å:- Chain Z: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.78: 2 residues within 4Å:- Chain 3: N.275
- Chain Z: E.139
No protein-ligand interaction detected (PLIP)MG.80: 5 residues within 4Å:- Chain 0: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.81: 2 residues within 4Å:- Chain 0: E.139
- Chain Z: N.275
No protein-ligand interaction detected (PLIP)MG.83: 5 residues within 4Å:- Chain 1: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.84: 2 residues within 4Å:- Chain 0: N.275
- Chain 1: E.139
No protein-ligand interaction detected (PLIP)MG.86: 5 residues within 4Å:- Chain 2: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.87: 2 residues within 4Å:- Chain 1: N.275
- Chain 2: E.139
No protein-ligand interaction detected (PLIP)MG.89: 5 residues within 4Å:- Chain 3: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.90: 2 residues within 4Å:- Chain 2: N.275
- Chain 3: E.139
No protein-ligand interaction detected (PLIP)MG.92: 5 residues within 4Å:- Chain 4: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.93: 2 residues within 4Å:- Chain 4: E.139
- Chain 8: N.275
No protein-ligand interaction detected (PLIP)MG.95: 5 residues within 4Å:- Chain 5: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.96: 2 residues within 4Å:- Chain 4: N.275
- Chain 5: E.139
No protein-ligand interaction detected (PLIP)MG.98: 5 residues within 4Å:- Chain 6: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.99: 2 residues within 4Å:- Chain 5: N.275
- Chain 6: E.139
No protein-ligand interaction detected (PLIP)MG.101: 5 residues within 4Å:- Chain 7: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.102: 2 residues within 4Å:- Chain 6: N.275
- Chain 7: E.139
No protein-ligand interaction detected (PLIP)MG.104: 5 residues within 4Å:- Chain 8: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.105: 2 residues within 4Å:- Chain 7: N.275
- Chain 8: E.139
No protein-ligand interaction detected (PLIP)MG.107: 5 residues within 4Å:- Chain 9: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.108: 2 residues within 4Å:- Chain 9: E.139
- Chain d: N.275
No protein-ligand interaction detected (PLIP)MG.110: 5 residues within 4Å:- Chain a: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.111: 2 residues within 4Å:- Chain 9: N.275
- Chain a: E.139
No protein-ligand interaction detected (PLIP)MG.113: 5 residues within 4Å:- Chain b: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.114: 2 residues within 4Å:- Chain a: N.275
- Chain b: E.139
No protein-ligand interaction detected (PLIP)MG.116: 5 residues within 4Å:- Chain c: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.117: 2 residues within 4Å:- Chain b: N.275
- Chain c: E.139
No protein-ligand interaction detected (PLIP)MG.119: 5 residues within 4Å:- Chain d: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.120: 2 residues within 4Å:- Chain c: N.275
- Chain d: E.139
No protein-ligand interaction detected (PLIP)MG.122: 5 residues within 4Å:- Chain e: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.123: 2 residues within 4Å:- Chain e: E.139
- Chain i: N.275
No protein-ligand interaction detected (PLIP)MG.125: 5 residues within 4Å:- Chain f: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.126: 2 residues within 4Å:- Chain e: N.275
- Chain f: E.139
No protein-ligand interaction detected (PLIP)MG.128: 5 residues within 4Å:- Chain g: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.129: 2 residues within 4Å:- Chain f: N.275
- Chain g: E.139
No protein-ligand interaction detected (PLIP)MG.131: 5 residues within 4Å:- Chain h: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.132: 2 residues within 4Å:- Chain g: N.275
- Chain h: E.139
No protein-ligand interaction detected (PLIP)MG.134: 5 residues within 4Å:- Chain i: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.135: 2 residues within 4Å:- Chain h: N.275
- Chain i: E.139
No protein-ligand interaction detected (PLIP)MG.137: 5 residues within 4Å:- Chain j: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.138: 2 residues within 4Å:- Chain j: E.139
- Chain n: N.275
No protein-ligand interaction detected (PLIP)MG.140: 5 residues within 4Å:- Chain k: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.141: 2 residues within 4Å:- Chain j: N.275
- Chain k: E.139
No protein-ligand interaction detected (PLIP)MG.143: 5 residues within 4Å:- Chain l: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.144: 2 residues within 4Å:- Chain k: N.275
- Chain l: E.139
No protein-ligand interaction detected (PLIP)MG.146: 5 residues within 4Å:- Chain m: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.147: 2 residues within 4Å:- Chain l: N.275
- Chain m: E.139
No protein-ligand interaction detected (PLIP)MG.149: 5 residues within 4Å:- Chain n: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.150: 2 residues within 4Å:- Chain m: N.275
- Chain n: E.139
No protein-ligand interaction detected (PLIP)MG.152: 5 residues within 4Å:- Chain o: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.153: 2 residues within 4Å:- Chain o: E.139
- Chain s: N.275
No protein-ligand interaction detected (PLIP)MG.155: 5 residues within 4Å:- Chain p: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.156: 2 residues within 4Å:- Chain o: N.275
- Chain p: E.139
No protein-ligand interaction detected (PLIP)MG.158: 5 residues within 4Å:- Chain q: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.159: 2 residues within 4Å:- Chain p: N.275
- Chain q: E.139
No protein-ligand interaction detected (PLIP)MG.161: 5 residues within 4Å:- Chain r: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.162: 2 residues within 4Å:- Chain q: N.275
- Chain r: E.139
No protein-ligand interaction detected (PLIP)MG.164: 5 residues within 4Å:- Chain s: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.165: 2 residues within 4Å:- Chain r: N.275
- Chain s: E.139
No protein-ligand interaction detected (PLIP)MG.167: 5 residues within 4Å:- Chain t: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.168: 2 residues within 4Å:- Chain t: E.139
- Chain x: N.275
No protein-ligand interaction detected (PLIP)MG.170: 5 residues within 4Å:- Chain u: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.171: 2 residues within 4Å:- Chain t: N.275
- Chain u: E.139
No protein-ligand interaction detected (PLIP)MG.173: 5 residues within 4Å:- Chain v: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.174: 2 residues within 4Å:- Chain u: N.275
- Chain v: E.139
No protein-ligand interaction detected (PLIP)MG.176: 5 residues within 4Å:- Chain w: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.177: 2 residues within 4Å:- Chain v: N.275
- Chain w: E.139
No protein-ligand interaction detected (PLIP)MG.179: 5 residues within 4Å:- Chain x: H.77, W.78, F.232, C.323, Y.324
No protein-ligand interaction detected (PLIP)MG.180: 2 residues within 4Å:- Chain w: N.275
- Chain x: E.139
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kaufmann, B. et al., Structure of Penaeus stylirostris densovirus, a shrimp pathogen. J.Virol. (2010)
- Release Date
- 2010-11-17
- Peptides
- Capsid protein: ABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789abcdefghijklmnopqrstuvwx
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
AY
AZ
A0
A1
A2
A3
A4
A5
A6
A7
A8
A9
Aa
Ab
Ac
Ad
Ae
Af
Ag
Ah
Ai
Aj
Ak
Al
Am
An
Ao
Ap
Aq
Ar
As
At
Au
Av
Aw
Ax
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-60-mer
- Ligands
- 60 x CA: CALCIUM ION(Non-covalent)
- 120 x MG: MAGNESIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kaufmann, B. et al., Structure of Penaeus stylirostris densovirus, a shrimp pathogen. J.Virol. (2010)
- Release Date
- 2010-11-17
- Peptides
- Capsid protein: ABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789abcdefghijklmnopqrstuvwx
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
AY
AZ
A0
A1
A2
A3
A4
A5
A6
A7
A8
A9
Aa
Ab
Ac
Ad
Ae
Af
Ag
Ah
Ai
Aj
Ak
Al
Am
An
Ao
Ap
Aq
Ar
As
At
Au
Av
Aw
Ax
A