SMTL ID : 3nay.1 (1 other biounit)

PDK1 in complex with inhibitor MP6

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x MP6: 4-(2-cyclopropylethylidene)-9-(1H-pyrazol-4-yl)-6-{[(1R)-1,2,2-trimethylpropyl]amino}benzo[c][1,6]naphthyridin-1(4H)-one(Non-covalent)

MP6.1: 20 residues within 4Å: Chain A: L.37, G.38, E.39, V.45, A.58, K.60, E.79, V.92, L.108, S.109, Y.110, A.111, K.112, G.114, E.115, E.158, N.159, L.161, T.171, D.172 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.37, A:V.45, A:K.60, A:L.108, A:N.159, A:L.161, A:L.161, A:T.171 Hydrogen bonds: A:K.35, A:S.109, A:Y.110, A:A.111, A:G.114, A:E.115

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nagashima, K. et al., Selective inhibition of PDK1 using an allosteric kinase inhibitor and RNAi impairs cancer cell migration and anchorage-independent growth of primary tumor lines. J.Biol.Chem. (2010)

Release Date

2010-11-24

Peptides

3-phosphoinositide-dependent protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

3-phosphoinositide-dependent protein kinase 1

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