SMTL ID : 3ngf.2 (1 other biounit)

Crystal structure of AP endonuclease, family 2 from Brucella melitensis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: E.150, D.185, Q.211, E.247 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.150, A:D.185, A:E.247, H2O.12, H2O.12

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: S.17, F.25, L.43, F.44, F.48 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.17, A:L.43, A:F.44 Water bridges: A:R.28 GOL.3: 6 residues within 4Å: Chain A: T.117, E.118, R.122, G.159, Y.160, F.161 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.122, A:G.159, A:F.161 Water bridges: A:T.117 GOL.4: 4 residues within 4Å: Chain A: T.154, R.155, I.191, M.192 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.155, A:I.191

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Staker, B. et al., Crystal structure of AP endonuclease, family 2 from Brucella melitensis. To be Published

Release Date

2010-07-07

Peptides

AP endonuclease, family 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

AP endonuclease, family 2

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