SMTL ID : 3nma.1

Mutant P169S of Foot-and-mouth disease Virus RNA dependent RNA-polymerase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x G- G- C: 5'-R(*GP*GP*C)-3'(Non-covalent)

G-G-C.1: 13 residues within 4Å: Chain A: G.107, L.108, D.109, R.193, H.204, G.216, C.217, N.218, S.301, S.304, Y.336 Ligands: C-C.2, C-C.2 Protein-ligand interaction information (PLIP) not available

1 x C- C: 5'-R(P*CP*C)-3'(Non-covalent)

C-C.2: 11 residues within 4Å: Chain A: Y.336, L.386, K.387, R.388, M.403, I.411, K.423, L.430 Ligands: G-G-C.1, G-G-C.1, G-G-C.1 Protein-ligand interaction information (PLIP) not available

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 5 residues within 4Å: Chain A: D.238, V.239, D.240, D.339, T.384 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.238, A:D.339

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Agudo, R. et al., A multi-step process of viral adaptation to a mutagenic nucleoside analogue by modulation of transition types leads to extinction-escape. Plos Pathog. (2010)

Release Date

2011-05-25

Peptides

Genome polyprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Genome polyprotein