SMTL ID : 3np9.1

Glycogen phosphorylase complexed with 3-(beta-D-glucopyranosyl)-2-hydroxy-5-methoxy-chlorobenzene

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x Z2T: (1S)-1,5-anhydro-1-(3-chloro-2-hydroxy-5-methoxyphenyl)-D-glucitol(Non-covalent)

Z2T.1: 17 residues within 4Å: Chain A: E.88, G.135, L.136, L.139, D.283, N.284, D.339, H.377, T.378, V.455, N.484, Y.573, E.672, A.673, S.674, G.675, T.676 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:L.136, A:L.136, A:H.377 Hydrogen bonds: A:G.135, A:L.136, A:E.672, A:E.672, A:A.673, A:S.674, A:G.675, A:G.675 Water bridges: A:G.137, A:D.283, A:D.283, A:D.283, A:N.284, A:K.574, A:T.676 Halogen bonds: A:E.88 Z2T.2: 17 residues within 4Å: Chain B: E.88, G.135, L.136, L.139, D.283, N.284, D.339, H.377, T.378, V.455, N.484, Y.573, E.672, A.673, S.674, G.675, T.676 19 PLIP interactions: 19 interactions with chain B Hydrophobic interactions: B:L.136, B:L.136, B:H.377 Hydrogen bonds: B:G.135, B:L.136, B:H.377, B:E.672, B:A.673, B:S.674, B:G.675, B:G.675 Water bridges: B:G.137, B:D.283, B:D.283, B:D.283, B:N.284, B:K.574, B:T.676 Halogen bonds: B:E.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Alexacou, K.M. et al., Halogen-substituted (C-beta-D-glucopyranosyl)-hydroquinone regioisomers: synthesis, enzymatic evaluation and their binding to glycogen phosphorylase. Bioorg.Med.Chem. (2011)

Release Date

2011-06-08

Peptides

Glycogen phosphorylase, muscle form: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glycogen phosphorylase, muscle form

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