SMTL ID : 3o49.1

Crystal structure of Symfoil-1: de novo designed beta-trefoil architecture with symmetric primary structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

monomer

Ligands

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1: 6 residues within 4Å: Chain A: T.36, V.37, T.78, V.79, T.120, V.121 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.37, A:V.79, A:V.121, A:V.121

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: R.72, T.82 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:T.82, A:T.82 Water bridges: A:R.72, A:R.72, A:R.83, A:D.87 Salt bridges: A:R.72

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, J. et al., Experimental support for the evolution of symmetric protein architecture from a simple peptide motif. Proc.Natl.Acad.Sci.USA (2011)

Release Date

2010-12-22

Peptides

de novo designed beta-trefoil architecture with symmetric primary structure: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

de novo designed beta-trefoil architecture with symmetric primary structure