SMTL ID : 3od9.2 (1 other biounit)

Crystal structure of PliI-Ah, periplasmic lysozyme inhibitor of I-type lysozyme from Aeromonas hydrophyla

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.41 Å

Oligo State

homo-dimer

Ligands

6 x NA: SODIUM ION(Non-functional Binders)

NA.1: 3 residues within 4Å: Chain A: E.101, L.103, D.104 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.103, A:D.104 Water bridges: A:D.51 NA.2: 6 residues within 4Å: Chain A: D.68, L.69, N.70, D.72, Q.74, E.76 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.68, A:L.69, A:N.70, A:D.72, A:D.72, A:Q.74 NA.3: 3 residues within 4Å: Chain A: K.53, D.104, S.105 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.53, A:D.104, A:D.104, A:S.105 Water bridges: A:S.105 NA.4: 3 residues within 4Å: Chain B: E.101, L.103, D.104 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:L.103, B:L.103 NA.5: 6 residues within 4Å: Chain B: D.68, L.69, N.70, D.72, Q.74, E.76 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:L.69, B:N.70, B:N.70, B:D.72, B:Q.74 NA.6: 3 residues within 4Å: Chain B: K.53, D.104, S.105 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:K.53, B:S.105, B:S.105 Water bridges: B:S.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Leysen, S. et al., Molecular Basis of Bacterial Defense against Host Lysozymes: X-ray Structures of Periplasmic Lysozyme Inhibitors PliI and PliC. J.Mol.Biol. (2011)

Release Date

2010-12-22

Peptides

Putative exported protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
C

Putative exported protein

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