- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.84 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)
- 3 x CA: CALCIUM ION(Non-covalent)
CA.2: 2 residues within 4Å:- Chain A: F.28, D.30
3 PLIP interactions:2 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:F.28, A:D.30, H2O.1
CA.9: 2 residues within 4Å:- Chain B: F.28, D.30
3 PLIP interactions:2 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:F.28, B:D.30, H2O.7
CA.16: 2 residues within 4Å:- Chain C: F.28, D.30
3 PLIP interactions:2 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:F.28, C:D.30, H2O.13
- 9 x MG: MAGNESIUM ION(Non-covalent)
MG.3: 3 residues within 4Å:- Chain A: S.17, T.35
- Ligands: GNP.1
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:S.17, A:T.35, H2O.1, H2O.1
MG.4: 5 residues within 4Å:- Chain A: T.124
- Chain B: T.124
- Chain C: T.124
- Ligands: MG.11, MG.18
No protein-ligand interaction detected (PLIP)MG.5: 1 residues within 4Å:- Chain A: R.102
2 PLIP interactions:1 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:R.102, H2O.6
MG.10: 3 residues within 4Å:- Chain B: S.17, T.35
- Ligands: GNP.8
4 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:S.17, B:T.35, H2O.6, H2O.6
MG.11: 5 residues within 4Å:- Chain A: T.124
- Chain B: T.124
- Chain C: T.124
- Ligands: MG.4, MG.18
No protein-ligand interaction detected (PLIP)MG.12: 1 residues within 4Å:- Chain B: R.102
2 PLIP interactions:1 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:R.102, H2O.12
MG.17: 3 residues within 4Å:- Chain C: S.17, T.35
- Ligands: GNP.15
4 PLIP interactions:2 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: C:S.17, C:T.35, H2O.12, H2O.12
MG.18: 5 residues within 4Å:- Chain A: T.124
- Chain B: T.124
- Chain C: T.124
- Ligands: MG.4, MG.11
No protein-ligand interaction detected (PLIP)MG.19: 1 residues within 4Å:- Chain C: R.102
2 PLIP interactions:1 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:R.102, H2O.17
- 6 x DTT: 2,3-DIHYDROXY-1,4-DITHIOBUTANE(Non-covalent)
DTT.6: 5 residues within 4Å:- Chain A: R.68, D.92, Q.95, Y.96, Q.99
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:R.68
DTT.7: 3 residues within 4Å:- Chain A: T.148, R.149, Q.150
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:T.148
DTT.13: 5 residues within 4Å:- Chain B: R.68, D.92, Q.95, Y.96, Q.99
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:R.68
DTT.14: 3 residues within 4Å:- Chain B: T.148, R.149, Q.150
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:T.148
DTT.20: 5 residues within 4Å:- Chain C: R.68, D.92, Q.95, Y.96, Q.99
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:R.68
DTT.21: 3 residues within 4Å:- Chain C: T.148, R.149, Q.150
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:T.148
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Buhrman, G. et al., Allosteric Modulation of Ras-GTP Is Linked to Signal Transduction through RAF Kinase. J.Biol.Chem. (2011)
- Release Date
- 2010-12-08
- Peptides
- GTPase HRas: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.84 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)
- 3 x CA: CALCIUM ION(Non-covalent)
- 9 x MG: MAGNESIUM ION(Non-covalent)
- 6 x DTT: 2,3-DIHYDROXY-1,4-DITHIOBUTANE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Buhrman, G. et al., Allosteric Modulation of Ras-GTP Is Linked to Signal Transduction through RAF Kinase. J.Biol.Chem. (2011)
- Release Date
- 2010-12-08
- Peptides
- GTPase HRas: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A