SMTL ID : 3omf.1

Crystal structure of a histidine triad family protein from Entamoeba histolytica, bound to AMP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.9, C.12, H.51, H.101 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.9, A:C.12, A:H.51, A:H.101 ZN.3: 4 residues within 4Å: Chain B: C.9, C.12, H.51, H.101 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.9, B:C.12, B:H.51, B:H.101

2 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.2: 15 residues within 4Å: Chain A: F.11, I.14, F.33, K.34, D.35, I.36, N.37, L.45, N.90, G.96, Q.97, T.98, V.99, H.103, H.105 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:I.36, A:N.37, A:N.37, A:N.90, A:G.96, A:T.98, A:V.99 Water bridges: A:P.20 Salt bridges: A:H.103, A:H.105 pi-Stacking: A:F.11 AMP.4: 15 residues within 4Å: Chain B: F.11, I.14, F.33, K.34, D.35, I.36, N.37, L.45, N.90, G.96, Q.97, T.98, V.99, H.103, H.105 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:I.36, B:N.37, B:N.37, B:N.90, B:G.96, B:T.98, B:V.99 Water bridges: B:P.20 Salt bridges: B:H.103, B:H.105 pi-Stacking: B:F.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lorimer, D.D. et al., Structures of a histidine triad family protein from Entamoeba histolytica bound to sulfate, AMP and GMP. Acta Crystallogr F Struct Biol Commun (2015)

Release Date

2010-09-08

Peptides

Putative histidine triad family protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Putative histidine triad family protein

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